Detailed information NTG1158794

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: QOS47_RS12835
• Genome accession: NZ_OX460909
• Coordinates: 2773153..2776527 (+)
• Length: 1124 a.a.
• NCBI ID: WP_045027463.1
• Uniprot ID: -
• Organism: Photobacterium phosphoreum strain MIP2473 isolate MIP2473
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2768153..2781527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOS47_RS12820	hemL	2768933..2770237 (+)	1305	WP_045027466.1	glutamate-1-semialdehyde 2,1-aminomutase	-
QOS47_RS12825	-	2770618..2771703 (+)	1086	WP_045027465.1	AI-2E family transporter	-
QOS47_RS12830	rsmC	2771863..2772882 (+)	1020	WP_107296038.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
QOS47_RS12835	chiS	2773153..2776527 (+)	3375	WP_045027463.1	response regulator	Regulator
QOS47_RS12840	-	2777275..2778951 (+)	1677	WP_283597849.1	ABC transporter substrate-binding protein	-
QOS47_RS12845	-	2779096..2780082 (+)	987	WP_065193971.1	ABC transporter permease	-
QOS47_RS12850	-	2780085..2781113 (+)	1029	WP_045027457.1	ABC transporter permease	-

Sequence

Protein

• Length: 1124 a.a.
• Molecular weight: 127073.59 Da
• Isoelectric Point: 6.3891

>NTDB_id=1158794 QOS47_RS12835 WP_045027463.1 2773153..2776527(+) (chiS) [Photobacterium phosphoreum strain MIP2473 isolate MIP2473]
MQNTKRFKRLQHTLMLAFLVLSITPLILSALYFLNSHTKDLAEQSINHLASLRDNKQKQLHSFFTAKESEVKSFARSELS
NNSGGRFYGLVGAFHQLGNIDSQLDAQGRANYFNLTLTTKSNQNSDRGYIGHERYRLMFKRYNAVYNEYLKRSDFKDIML
VDISGDIVYSVKNHDLFGVNLLTDTSHLALQQTFKAIKTKTEQSQNSQEQVPVVFTDFSANNHNTDTTAWFAAPIIQQGY
LHSYVFMELSNKKVAELIQDNTKHIQTLLVGSDHQLRFESNHQLPPQLQSQSIDQALAGKSGIGSFINYDNIPVLGAFSP
LEILGHHWALVVEFPEKEAFSRIFELEKIFVAAMVSAIILVIITSHWLSNSITAPLLRLTWAAEKASGGDLEQKIDGTER
RDEIGRLAISFARMQRSIREKMGLIREQNKELEHNLTIIRQQNNELQTADKMKDEFLATTSHELRTPLHGMVGIAESLLA
GANGALHQSQRRQLEMIISSGQRLTTLVDDLLDYHKMRYGDLDIHHQAVDMSVAIRLVLELSSHLLGNKPIRIINQIPAD
LPLVDADEQRLEQVLYNLVGNAIKYTSEGKIILSATVLEHQLRIQVVDTGQGIPSEQLEHIFEPLIQANTGSANYRQGAG
LGLSISRQLIELMGGRLYVSSQQMVGTTFSFTLNLANANQIAAMAASPNNNHFKAPLLHTTNYDPSDLPENPDGELLLIV
DDEPVNLQILTNFLRLGGYRVQTAESGPQALALITAQQPDLVLLDIMMPEMSGYEVCTILRKDHSMLALPIIMLSALGQV
QDRLKGFECGANDYLTKPFNKEELIARIRAYLQAGKTEIERQKNHALEQEIHRREQVEIGLIETQSRLLGLLDSTSEAII
CVQQEGRIRYANSAAGKLFKRTPELLERHNIDDILVTPLPIATTDNHHFNGHLNYYIADQQQQLMTDVINLPAESGLKQM
FVFDNQGPSADHRINLLENAIDVLSEFAFNGDKNNLQQLRELGGEFTRLADKLGDGEHNKTEIIRQLLVDAMRATLVFWE
AESNKNKFELAEESGLWRVYLDRSTLQTRTLDKYLQLETLPKTPRWRTVINTIDYVLERCQQSNSARQELVIMRDKLHHI
ISHN

Nucleotide

• Length: 3375 bp

>NTDB_id=1158794 QOS47_RS12835 WP_045027463.1 2773153..2776527(+) (chiS) [Photobacterium phosphoreum strain MIP2473 isolate MIP2473]
ATGCAGAATACTAAACGCTTCAAACGTCTTCAGCACACACTTATGCTGGCATTTTTAGTGCTCAGTATCACCCCATTGAT
ATTGTCAGCACTCTATTTTCTTAATTCACATACCAAAGATTTAGCCGAGCAGAGTATTAATCATCTGGCTTCATTACGTG
ACAATAAACAAAAGCAACTCCACAGCTTTTTTACGGCCAAAGAATCAGAAGTTAAGAGCTTTGCTCGCTCAGAATTATCC
AATAATAGTGGCGGCCGGTTTTATGGTTTAGTCGGAGCATTCCACCAGCTCGGTAATATTGATTCACAACTTGATGCACA
AGGTCGCGCCAACTATTTTAATTTAACCTTAACCACCAAAAGTAATCAAAATTCCGACCGAGGATATATTGGTCACGAAC
GGTATCGATTAATGTTTAAGCGTTATAACGCCGTGTATAACGAGTACCTTAAACGCTCTGATTTCAAAGATATTATGTTG
GTCGATATCTCGGGGGATATCGTCTACTCAGTGAAAAATCATGATCTTTTTGGGGTTAATTTATTAACCGACACCTCACA
CCTTGCATTACAGCAAACATTTAAAGCCATTAAGACGAAAACCGAACAAAGCCAAAATAGCCAAGAACAAGTACCGGTAG
TGTTTACTGACTTTAGCGCTAACAATCATAATACCGATACTACCGCTTGGTTTGCCGCCCCGATTATTCAGCAAGGTTAC
CTACACAGTTATGTGTTTATGGAACTGAGTAATAAAAAAGTGGCGGAGTTAATTCAAGATAATACCAAGCATATTCAAAC
ACTCTTAGTCGGTAGTGATCACCAACTGCGGTTTGAATCTAATCATCAATTACCACCACAATTACAAAGCCAAAGTATTG
ATCAAGCGTTAGCGGGGAAATCGGGGATCGGGAGTTTTATCAACTACGATAATATTCCGGTATTAGGTGCTTTTTCTCCT
TTGGAAATTTTAGGTCATCACTGGGCATTAGTAGTTGAATTTCCTGAAAAAGAGGCGTTTTCACGTATATTTGAATTAGA
GAAAATATTTGTTGCCGCAATGGTATCTGCAATTATTTTAGTGATCATTACTTCGCATTGGCTCTCTAACTCGATCACTG
CACCGTTATTACGCTTAACGTGGGCGGCAGAAAAAGCCTCTGGTGGTGATTTAGAACAAAAAATTGATGGTACTGAACGC
CGAGATGAAATCGGCCGCTTAGCGATCAGTTTTGCTCGTATGCAACGATCTATCCGTGAAAAAATGGGACTTATTCGCGA
GCAAAATAAAGAGTTAGAACATAACCTGACCATCATTCGCCAGCAAAACAATGAACTTCAAACAGCAGATAAAATGAAAG
ATGAGTTTCTGGCAACAACATCGCACGAATTACGCACCCCACTCCATGGCATGGTGGGTATCGCTGAATCTTTATTAGCA
GGCGCTAACGGTGCATTACATCAATCACAACGACGTCAATTAGAAATGATCATCAGCAGTGGTCAACGCTTAACCACACT
GGTTGATGATCTGCTTGATTACCACAAAATGCGTTATGGCGATCTTGATATTCACCATCAAGCGGTTGATATGTCAGTCG
CGATTCGATTAGTGTTGGAGTTATCTAGTCATTTATTGGGTAATAAACCGATTCGTATTATTAACCAAATTCCAGCAGAT
CTGCCTCTAGTTGATGCTGATGAGCAACGTTTAGAGCAAGTGCTATATAACTTAGTCGGTAATGCGATTAAATATACCTC
TGAAGGTAAAATCATTTTATCGGCAACGGTATTAGAGCATCAATTACGGATTCAAGTGGTTGATACCGGACAAGGTATTC
CAAGTGAACAACTAGAACATATTTTTGAGCCGTTAATCCAAGCCAATACTGGGTCGGCAAATTACCGTCAAGGCGCAGGG
CTTGGGTTATCGATCAGTCGCCAATTGATTGAACTAATGGGAGGGCGGTTATATGTCAGTAGCCAACAAATGGTCGGTAC
GACCTTTAGCTTCACTCTCAACCTCGCCAATGCTAACCAAATTGCAGCAATGGCGGCTAGCCCTAATAACAATCACTTTA
AAGCACCATTACTACATACAACTAACTACGATCCGTCTGATTTACCAGAGAACCCAGACGGTGAATTATTACTGATTGTT
GACGATGAACCGGTAAATCTACAAATCTTAACCAACTTCTTACGTCTTGGTGGTTATCGTGTACAAACCGCTGAAAGTGG
CCCGCAAGCATTAGCATTGATCACCGCACAACAACCTGATCTGGTATTACTTGATATTATGATGCCAGAAATGAGTGGCT
ATGAAGTATGTACTATCTTACGCAAAGATCACTCGATGCTAGCTTTACCCATCATTATGTTATCAGCCCTTGGTCAAGTA
CAAGATCGCTTAAAAGGTTTTGAGTGTGGCGCCAATGACTACTTAACCAAACCATTTAATAAAGAAGAGTTAATTGCGCG
TATTCGTGCTTACCTTCAAGCAGGTAAAACCGAAATTGAACGCCAGAAAAATCACGCATTAGAGCAAGAGATCCACCGCC
GTGAACAAGTTGAAATTGGACTGATTGAAACCCAAAGTCGCTTGCTTGGGTTATTAGATTCAACCAGTGAGGCAATTATC
TGCGTCCAACAAGAAGGTCGAATTCGCTATGCTAACAGTGCCGCCGGTAAGCTGTTTAAACGAACACCTGAATTGCTAGA
GCGCCATAACATTGATGATATTTTAGTAACACCGCTACCAATAGCAACCACTGATAATCACCATTTTAATGGCCATTTAA
ATTATTATATCGCTGACCAGCAACAACAATTAATGACTGATGTAATCAATTTACCCGCAGAATCTGGACTTAAACAAATG
TTTGTTTTTGATAACCAAGGACCATCAGCCGATCATCGCATTAATCTGCTTGAAAATGCGATTGATGTCTTGTCTGAATT
TGCTTTTAATGGCGATAAAAACAACCTCCAGCAATTACGCGAATTAGGCGGAGAGTTTACCCGTTTAGCAGATAAATTAG
GTGATGGCGAACATAATAAAACCGAAATCATTCGCCAATTATTAGTCGATGCAATGAGAGCAACATTGGTATTTTGGGAG
GCAGAATCCAATAAAAACAAATTTGAATTAGCCGAAGAAAGTGGTCTCTGGCGTGTCTATCTAGACCGTAGTACGCTCCA
AACTCGCACGTTAGATAAATACCTTCAGCTTGAAACACTGCCGAAGACACCCCGTTGGCGTACGGTGATAAATACCATTG
ATTATGTATTGGAACGCTGCCAACAATCCAATAGTGCCCGTCAAGAACTGGTCATTATGCGCGATAAATTACATCATATT
ATTAGCCATAACTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (367-420)

• His Kinase A (phospho-acceptor) domain (HisKA) (452-518)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (567-676)

• Response regulator receiver domain (Response_reg) (718-829)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	55.919	100	0.563