Detailed information NTG1158743

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QOR56_RS04440
• Genome accession: NZ_OX460906
• Coordinates: 846618..847844 (+)
• Length: 408 a.a.
• NCBI ID: WP_283572290.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-265
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 841618..852844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR56_RS04415	-	841836..842284 (-)	449	Protein_789	DUF1836 domain-containing protein	-
QOR56_RS04420	-	842376..843659 (-)	1284	WP_283572163.1	hydroxymethylglutaryl-CoA reductase, degradative	-
QOR56_RS04425	-	843661..844833 (-)	1173	WP_001873152.1	hydroxymethylglutaryl-CoA synthase	-
QOR56_RS04430	-	844987..845826 (+)	840	WP_000158595.1	thymidylate synthase	-
QOR56_RS04435	-	845906..846400 (+)	495	WP_000166043.1	dihydrofolate reductase	-
QOR56_RS04440	clpX	846618..847844 (+)	1227	WP_283572290.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QOR56_RS04445	yihA	847855..848451 (+)	597	WP_000796925.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
QOR56_RS04450	-	848513..849061 (-)	549	WP_047209499.1	TetR/AcrR family transcriptional regulator	-
QOR56_RS04455	-	849334..849657 (+)	324	WP_283572162.1	HXXEE domain-containing protein	-
QOR56_RS04460	-	849815..850465 (+)	651	WP_000120090.1	HXXEE domain-containing protein	-
QOR56_RS04465	-	850595..851971 (+)	1377	Protein_799	amino acid permease	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 44835.31 Da
• Isoelectric Point: 4.5016

>NTDB_id=1158743 QOR56_RS04440 WP_283572290.1 846618..847844(+) (clpX) [Streptococcus agalactiae isolate MRI Z2-265]
MAGNRNNDMNVYCSFCGKSQDEVKKIIAGNGVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLEILNQYVVGQDR
AKRALAVAVYNHYKRVSYTESSDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENIL
LKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQINTKN
ILFIVGGAFDGIEDLVKQRLGEKVIGFGQTSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVAALELLTAKDLVRIL
TEPRNALVKQYQTLLSYDGVELEFDQDALLAIADKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEGT
DKPVLETA

Nucleotide

• Length: 1227 bp

>NTDB_id=1158743 QOR56_RS04440 WP_283572290.1 846618..847844(+) (clpX) [Streptococcus agalactiae isolate MRI Z2-265]
ATGGCTGGGAATCGTAATAACGATATGAATGTCTATTGTTCATTTTGTGGCAAAAGCCAAGATGAAGTAAAAAAAATTAT
TGCAGGTAATGGTGTTTTCATTTGTAATGAATGTGTGGCCTTATCACAAGAAATTATTAAGGAAGAATTAGCTGAGGAAG
TACTGGCTGATTTAGCAGAAGTACCAAAACCTAAGGAACTATTAGAAATATTAAATCAATATGTTGTAGGGCAAGATCGT
GCTAAACGTGCTTTAGCAGTTGCTGTCTACAATCATTACAAGCGTGTTAGTTATACCGAGAGTAGTGACGATGATGTAGA
TTTGCAAAAATCCAACATTTTGATGATTGGTCCAACTGGCTCAGGAAAAACCTTCTTAGCACAAACACTGGCTAAAAGCC
TTAATGTACCATTTGCTATTGCAGATGCGACTTCATTGACCGAAGCAGGATACGTTGGAGAAGATGTTGAGAATATTCTT
CTTAAATTGATTCAAGCTGCTGATTATAATGTCGAACGTGCTGAGCGTGGTATTATCTACGTTGATGAAATAGATAAAAT
TGCTAAGAAAGGCGAAAATGTTTCTATCACACGTGATGTGTCTGGTGAAGGTGTACAGCAAGCCCTTCTTAAAATTATTG
AGGGTACGGTAGCAAGTGTTCCCCCACAGGGTGGGCGTAAACATCCTAACCAAGAAATGATTCAAATTAATACCAAGAAC
ATCCTTTTTATTGTCGGTGGTGCTTTTGATGGTATTGAAGACCTTGTGAAGCAACGTTTAGGCGAAAAAGTTATTGGTTT
TGGACAGACAAGCCGCAAAATTGATGACAACGCTTCTTATATGCAAGAGATAATTTCTGAGGATATTCAAAAGTTTGGAC
TGATTCCAGAGTTTATTGGCCGTTTACCAGTAGTTGCAGCGTTAGAACTTCTTACTGCAAAAGATCTGGTTCGTATTCTG
ACAGAACCACGCAATGCTTTGGTTAAACAATACCAAACCTTATTATCTTATGATGGTGTAGAATTGGAATTTGATCAGGA
TGCTCTATTGGCTATCGCTGATAAGGCTATCGAGCGCAAGACTGGTGCACGTGGTTTACGTTCTATTATTGAAGAAACGA
TGCTTGATATCATGTTTGAAATTCCAAGCCAAGAAGATGTAACAAAAGTTCGTATCACAAAGGCTGCTGTTGAGGGTACT
GACAAGCCTGTTTTAGAGACGGCTTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (109-304)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.465	100	0.907
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58	98.039	0.569