Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | P4E82_RS03605 | Genome accession | NZ_OX442413 |
| Coordinates | 724745..725050 (-) | Length | 101 a.a. |
| NCBI ID | WP_002834517.1 | Uniprot ID | A0A5T0ZVB2 |
| Organism | Campylobacter coli isolate pure strain | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 719745..730050
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P4E82_RS03570 | - | 720160..720921 (+) | 762 | WP_025431509.1 | ATP-binding protein | - |
| P4E82_RS03575 | - | 720918..721601 (+) | 684 | WP_002791740.1 | 3-methyladenine DNA glycosylase | - |
| P4E82_RS03580 | thiD | 721601..722413 (+) | 813 | WP_002786353.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| P4E82_RS03585 | thiE | 722403..723035 (+) | 633 | WP_318764473.1 | thiamine phosphate synthase | - |
| P4E82_RS03590 | - | 723013..723642 (+) | 630 | WP_002783358.1 | uroporphyrinogen-III synthase | - |
| P4E82_RS03595 | - | 723635..724087 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| P4E82_RS03600 | - | 724084..724752 (-) | 669 | WP_002797569.1 | hypothetical protein | - |
| P4E82_RS03605 | ctsT | 724745..725050 (-) | 306 | WP_002834517.1 | hypothetical protein | Machinery gene |
| P4E82_RS03610 | proC | 725047..725784 (-) | 738 | WP_002834520.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| P4E82_RS03615 | fliW | 725784..726173 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| P4E82_RS03620 | - | 726337..726984 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| P4E82_RS03625 | lon | 727000..729375 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| P4E82_RS03630 | rpsR | 729431..729691 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12456.28 Da Isoelectric Point: 6.0633
>NTDB_id=1158370 P4E82_RS03605 WP_002834517.1 724745..725050(-) (ctsT) [Campylobacter coli isolate pure strain]
MKVAFSLLELILYIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILYIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=1158370 P4E82_RS03605 WP_002834517.1 724745..725050(-) (ctsT) [Campylobacter coli isolate pure strain]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTATATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTATATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |