Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE0566   Type   Regulator
Locus tag   QOR69_RS06890 Genome accession   NZ_OX437056
Coordinates   1290088..1290738 (-) Length   216 a.a.
NCBI ID   WP_079755920.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1285088..1295738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR69_RS06850 - 1285179..1285574 (-) 396 WP_002840681.1 hypothetical protein -
  QOR69_RS06855 - 1285576..1285968 (-) 393 WP_002794923.1 hypothetical protein -
  QOR69_RS06860 - 1285985..1286830 (-) 846 WP_019108610.1 BspA family leucine-rich repeat surface protein -
  QOR69_RS06865 - 1286845..1287849 (-) 1005 WP_002897876.1 toxic anion resistance protein -
  QOR69_RS06870 - 1288259..1288669 (-) 411 WP_282950555.1 hypothetical protein -
  QOR69_RS06875 - 1288690..1289157 (-) 468 WP_043019044.1 hypothetical protein -
  QOR69_RS06880 - 1289154..1289681 (-) 528 WP_052805217.1 hypothetical protein -
  QOR69_RS06885 - 1289690..1289908 (-) 219 WP_002801018.1 hypothetical protein -
  QOR69_RS06890 CJE0566 1290088..1290738 (-) 651 WP_079755920.1 DNA/RNA non-specific endonuclease Regulator
  QOR69_RS06895 - 1290757..1291413 (-) 657 WP_282950556.1 hypothetical protein -
  QOR69_RS06900 - 1291410..1291925 (-) 516 WP_002897191.1 hypothetical protein -
  QOR69_RS06905 - 1291994..1292176 (-) 183 WP_002897189.1 YlcI/YnfO family protein -
  QOR69_RS06910 - 1292206..1292625 (-) 420 WP_052806035.1 hypothetical protein -
  QOR69_RS06915 - 1292622..1293113 (-) 492 WP_144659600.1 YopX family protein -
  QOR69_RS06920 - 1293296..1293646 (-) 351 WP_002840065.1 hypothetical protein -
  QOR69_RS06925 - 1293643..1293834 (-) 192 WP_002840066.1 hypothetical protein -
  QOR69_RS06930 - 1293836..1294504 (-) 669 WP_052783815.1 hypothetical protein -
  QOR69_RS06935 - 1294510..1294860 (-) 351 WP_002875041.1 hypothetical protein -
  QOR69_RS06940 - 1294860..1295270 (-) 411 WP_052805354.1 YopX family protein -
  QOR69_RS06945 - 1295257..1295532 (-) 276 WP_052805355.1 hypothetical protein -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 25522.03 Da        Isoelectric Point: 9.7865

>NTDB_id=1158133 QOR69_RS06890 WP_079755920.1 1290088..1290738(-) (CJE0566) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
MKKLMILPLLATLAFADYTQYKPSEDFAKYFTKQSCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKILKGDNFKECYQVPNHEVEDESIRSYQIKCQF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=1158133 QOR69_RS06890 WP_079755920.1 1290088..1290738(-) (CJE0566) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
ATGAAAAAACTTATGATTTTACCGTTGCTAGCAACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACAAAAGCCGTAGCTTATAGATTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGACACACTCT
TTCTAATGCTTCCATGAGAAAAACAACTCAAGCTCAAAGAAGCACCTTTTTGATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGATCTTATCAGATCAAGT
GTCAATTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

93.925

99.074

0.931

  CJE1441 Campylobacter jejuni RM1221

92.056

99.074

0.912


Multiple sequence alignment