Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   KJP56_RS06520 Genome accession   NZ_OX419652
Coordinates   1262568..1262759 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis isolate NRS6131     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1257568..1267759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP56_RS06490 (NRS6131_06475) argF 1258431..1259390 (+) 960 WP_213419342.1 ornithine carbamoyltransferase -
  KJP56_RS06495 (NRS6131_06480) yjzC 1259476..1259655 (+) 180 WP_003245356.1 YjzC family protein -
  KJP56_RS06500 (NRS6131_06485) yjzD 1259702..1259887 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  KJP56_RS06505 (NRS6131_06490) - 1260136..1260870 (+) 735 WP_003245223.1 hypothetical protein -
  KJP56_RS06510 (NRS6131_06495) - 1260952..1261509 (+) 558 WP_213419343.1 hypothetical protein -
  KJP56_RS06515 (NRS6131_06500) med 1261600..1262553 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  KJP56_RS06520 (NRS6131_06505) comZ 1262568..1262759 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  KJP56_RS06525 (NRS6131_06510) yjzB 1262789..1263028 (-) 240 WP_213419344.1 spore coat protein YjzB -
  KJP56_RS06530 (NRS6131_06515) fabH 1263193..1264131 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  KJP56_RS06535 (NRS6131_06520) fabF 1264154..1265395 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  KJP56_RS06540 (NRS6131_06525) yjaZ 1265471..1266256 (+) 786 WP_213419345.1 DUF2268 domain-containing protein -
  KJP56_RS06545 (NRS6131_06530) appD 1266448..1267434 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1158051 KJP56_RS06520 WP_003224559.1 1262568..1262759(+) (comZ) [Bacillus subtilis isolate NRS6131]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1158051 KJP56_RS06520 WP_003224559.1 1262568..1262759(+) (comZ) [Bacillus subtilis isolate NRS6131]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment