Detailed information NTG1158050

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: KJP56_RS06515
• Genome accession: NZ_OX419652
• Coordinates: 1261600..1262553 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis isolate NRS6131
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1256600..1267553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP56_RS06490 (NRS6131_06475)	argF	1258431..1259390 (+)	960	WP_213419342.1	ornithine carbamoyltransferase	-
KJP56_RS06495 (NRS6131_06480)	yjzC	1259476..1259655 (+)	180	WP_003245356.1	YjzC family protein	-
KJP56_RS06500 (NRS6131_06485)	yjzD	1259702..1259887 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
KJP56_RS06505 (NRS6131_06490)	-	1260136..1260870 (+)	735	WP_003245223.1	hypothetical protein	-
KJP56_RS06510 (NRS6131_06495)	-	1260952..1261509 (+)	558	WP_213419343.1	hypothetical protein	-
KJP56_RS06515 (NRS6131_06500)	med	1261600..1262553 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
KJP56_RS06520 (NRS6131_06505)	comZ	1262568..1262759 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
KJP56_RS06525 (NRS6131_06510)	yjzB	1262789..1263028 (-)	240	WP_213419344.1	spore coat protein YjzB	-
KJP56_RS06530 (NRS6131_06515)	fabH	1263193..1264131 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
KJP56_RS06535 (NRS6131_06520)	fabF	1264154..1265395 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
KJP56_RS06540 (NRS6131_06525)	yjaZ	1265471..1266256 (+)	786	WP_213419345.1	DUF2268 domain-containing protein	-
KJP56_RS06545 (NRS6131_06530)	appD	1266448..1267434 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=1158050 KJP56_RS06515 WP_014476425.1 1261600..1262553(+) (med) [Bacillus subtilis isolate NRS6131]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1158050 KJP56_RS06515 WP_014476425.1 1261600..1262553(+) (med) [Bacillus subtilis isolate NRS6131]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997