Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   KJP60_RS17865 Genome accession   NZ_OX419580
Coordinates   3348942..3349082 (-) Length   46 a.a.
NCBI ID   WP_003220708.1    Uniprot ID   G4P060
Organism   Bacillus subtilis isolate NRS6116     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3343942..3354082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP60_RS17840 (NRS6116_17825) yuxO 3344255..3344635 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  KJP60_RS17845 (NRS6116_17830) comA 3344654..3345298 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  KJP60_RS17850 (NRS6116_17835) comP 3345379..3347688 (-) 2310 WP_015251333.1 two-component system sensor histidine kinase ComP Regulator
  KJP60_RS17855 (NRS6116_17840) comX 3347703..3347870 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  KJP60_RS17860 (NRS6116_17845) comQ 3347858..3348757 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  KJP60_RS17865 (NRS6116_17850) degQ 3348942..3349082 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  KJP60_RS17870 - 3349304..3349429 (+) 126 WP_003228793.1 hypothetical protein -
  KJP60_RS17875 (NRS6116_17855) - 3349543..3349911 (+) 369 WP_003243784.1 hypothetical protein -
  KJP60_RS17880 (NRS6116_17860) pdeH 3349887..3351116 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  KJP60_RS17885 (NRS6116_17865) pncB 3351253..3352725 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  KJP60_RS17890 (NRS6116_17870) pncA 3352741..3353292 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -
  KJP60_RS17895 (NRS6116_17875) yueI 3353389..3353787 (-) 399 WP_003242987.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5546.44 Da        Isoelectric Point: 6.2559

>NTDB_id=1158014 KJP60_RS17865 WP_003220708.1 3348942..3349082(-) (degQ) [Bacillus subtilis isolate NRS6116]
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1158014 KJP60_RS17865 WP_003220708.1 3348942..3349082(-) (degQ) [Bacillus subtilis isolate NRS6116]
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4P060

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment