Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SMUFR_RS09095 | Genome accession | NZ_CP007016 |
| Coordinates | 1850200..1851153 (-) | Length | 317 a.a. |
| NCBI ID | WP_002263442.1 | Uniprot ID | Q8DS56 |
| Organism | Streptococcus mutans UA159-FR | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1845200..1856153
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMUFR_RS09070 (SMUFR_1712) | proC | 1846149..1846919 (+) | 771 | WP_002263447.1 | pyrroline-5-carboxylate reductase | - |
| SMUFR_RS09075 (SMUFR_1713) | - | 1847004..1847666 (-) | 663 | WP_002263446.1 | type II CAAX endopeptidase family protein | - |
| SMUFR_RS09080 (SMUFR_1714) | - | 1847719..1848159 (-) | 441 | WP_002263445.1 | hypothetical protein | - |
| SMUFR_RS09085 (SMUFR_1715) | - | 1848128..1848373 (-) | 246 | WP_002263444.1 | helix-turn-helix transcriptional regulator | - |
| SMUFR_RS09090 (SMUFR_1716) | - | 1848942..1850141 (-) | 1200 | WP_002263443.1 | acetate kinase | - |
| SMUFR_RS09095 (SMUFR_1717) | comYH | 1850200..1851153 (-) | 954 | WP_002263442.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SMUFR_RS09100 (SMUFR_1718) | comYG | 1851208..1851597 (-) | 390 | WP_002263441.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SMUFR_RS09105 (SMUFR_1719) | comYF | 1851575..1852009 (-) | 435 | WP_002263440.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SMUFR_RS09110 (SMUFR_1720) | comYE | 1851996..1852289 (-) | 294 | WP_002263439.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SMUFR_RS09115 (SMUFR_1721) | comYD | 1852261..1852665 (-) | 405 | WP_002263438.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SMUFR_RS09120 (SMUFR_1722) | comYC | 1852652..1852966 (-) | 315 | WP_002263437.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SMUFR_RS09125 (SMUFR_1723) | comYB | 1852966..1853997 (-) | 1032 | WP_255262721.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SMUFR_RS09130 (SMUFR_1724) | comYA | 1853933..1854874 (-) | 942 | WP_002263435.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SMUFR_RS09135 (SMUFR_1725) | - | 1855004..1855387 (-) | 384 | WP_002263434.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36272.56 Da Isoelectric Point: 5.2379
>NTDB_id=115795 SMUFR_RS09095 WP_002263442.1 1850200..1851153(-) (comYH) [Streptococcus mutans UA159-FR]
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDIIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDIIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
Nucleotide
Download Length: 954 bp
>NTDB_id=115795 SMUFR_RS09095 WP_002263442.1 1850200..1851153(-) (comYH) [Streptococcus mutans UA159-FR]
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGCTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGACGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATATCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGCTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGACGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATATCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
100 |
100 |
1 |
| comYH | Streptococcus mutans UA140 |
99.369 |
100 |
0.994 |