Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   KJP43_RS20460 Genome accession   NZ_OX419579
Coordinates   3901771..3901890 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis isolate NRS6103     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3896771..3906890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP43_RS20440 (NRS6103_20235) albG 3896935..3897636 (+) 702 WP_153940242.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  KJP43_RS20445 (NRS6103_20240) ywhL 3897642..3899018 (-) 1377 WP_015250987.1 YncE family protein -
  KJP43_RS20450 (NRS6103_20245) ywhK 3899057..3900412 (-) 1356 WP_003227552.1 YncE family protein -
  KJP43_RS20455 (NRS6103_20250) rapF 3900642..3901787 (+) 1146 WP_015714890.1 response regulator aspartate phosphatase RapF Regulator
  KJP43_RS20460 (NRS6103_20255) phrF 3901771..3901890 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  KJP43_RS20465 (NRS6103_20265) - 3902147..3902626 (+) 480 WP_015714892.1 hypothetical protein -
  KJP43_RS20470 (NRS6103_20270) - 3902775..3903563 (+) 789 WP_015714893.1 membrane protein -
  KJP43_RS20475 (NRS6103_20275) - 3903550..3904224 (+) 675 WP_015714894.1 hypothetical protein -
  KJP43_RS20480 (NRS6103_20280) - 3904234..3905031 (+) 798 WP_231573542.1 hypothetical protein -
  KJP43_RS20485 (NRS6103_20285) - 3905034..3905681 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  KJP43_RS20490 (NRS6103_20290) - 3905674..3906234 (+) 561 WP_029726083.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1157939 KJP43_RS20460 WP_009968329.1 3901771..3901890(+) (phrF) [Bacillus subtilis isolate NRS6103]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1157939 KJP43_RS20460 WP_009968329.1 3901771..3901890(+) (phrF) [Bacillus subtilis isolate NRS6103]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment