Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KJP45_RS05995 Genome accession   NZ_OX419578
Coordinates   1161953..1162144 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis isolate NRS6128     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1156953..1167144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP45_RS05965 (NRS6128_05910) argF 1157818..1158777 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  KJP45_RS05970 (NRS6128_05915) yjzC 1158863..1159042 (+) 180 WP_003245356.1 YjzC family protein -
  KJP45_RS05975 (NRS6128_05920) yjzD 1159088..1159273 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  KJP45_RS05980 (NRS6128_05925) - 1159522..1160256 (+) 735 WP_033883595.1 hypothetical protein -
  KJP45_RS05985 (NRS6128_05930) - 1160338..1160895 (+) 558 WP_014479435.1 hypothetical protein -
  KJP45_RS05990 (NRS6128_05935) med 1160985..1161938 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  KJP45_RS05995 (NRS6128_05940) comZ 1161953..1162144 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  KJP45_RS06000 (NRS6128_05945) yjzB 1162174..1162413 (-) 240 WP_003232972.1 spore coat protein YjzB -
  KJP45_RS06005 (NRS6128_05950) fabH 1162578..1163516 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  KJP45_RS06010 (NRS6128_05955) fabF 1163539..1164780 (+) 1242 WP_213414412.1 beta-ketoacyl-ACP synthase II -
  KJP45_RS06015 (NRS6128_05960) yjaZ 1164856..1165641 (+) 786 WP_033883592.1 DUF2268 domain-containing protein -
  KJP45_RS06020 (NRS6128_05965) appD 1165833..1166819 (+) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1157808 KJP45_RS05995 WP_003224559.1 1161953..1162144(+) (comZ) [Bacillus subtilis isolate NRS6128]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1157808 KJP45_RS05995 WP_003224559.1 1161953..1162144(+) (comZ) [Bacillus subtilis isolate NRS6128]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment