Detailed information NTG1157807

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: KJP45_RS05990
• Genome accession: NZ_OX419578
• Coordinates: 1160985..1161938 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis isolate NRS6128
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1155985..1166938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP45_RS05965 (NRS6128_05910)	argF	1157818..1158777 (+)	960	WP_014476421.1	ornithine carbamoyltransferase	-
KJP45_RS05970 (NRS6128_05915)	yjzC	1158863..1159042 (+)	180	WP_003245356.1	YjzC family protein	-
KJP45_RS05975 (NRS6128_05920)	yjzD	1159088..1159273 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
KJP45_RS05980 (NRS6128_05925)	-	1159522..1160256 (+)	735	WP_033883595.1	hypothetical protein	-
KJP45_RS05985 (NRS6128_05930)	-	1160338..1160895 (+)	558	WP_014479435.1	hypothetical protein	-
KJP45_RS05990 (NRS6128_05935)	med	1160985..1161938 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
KJP45_RS05995 (NRS6128_05940)	comZ	1161953..1162144 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
KJP45_RS06000 (NRS6128_05945)	yjzB	1162174..1162413 (-)	240	WP_003232972.1	spore coat protein YjzB	-
KJP45_RS06005 (NRS6128_05950)	fabH	1162578..1163516 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
KJP45_RS06010 (NRS6128_05955)	fabF	1163539..1164780 (+)	1242	WP_213414412.1	beta-ketoacyl-ACP synthase II	-
KJP45_RS06015 (NRS6128_05960)	yjaZ	1164856..1165641 (+)	786	WP_033883592.1	DUF2268 domain-containing protein	-
KJP45_RS06020 (NRS6128_05965)	appD	1165833..1166819 (+)	987	WP_046160279.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=1157807 KJP45_RS05990 WP_014476425.1 1160985..1161938(+) (med) [Bacillus subtilis isolate NRS6128]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1157807 KJP45_RS05990 WP_014476425.1 1160985..1161938(+) (med) [Bacillus subtilis isolate NRS6128]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCCGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997