Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | KJP47_RS13240 | Genome accession | NZ_OX419577 |
| Coordinates | 2458384..2459421 (-) | Length | 345 a.a. |
| NCBI ID | WP_121590958.1 | Uniprot ID | - |
| Organism | Bacillus subtilis isolate NRS6120 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2453384..2464421
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP47_RS13190 (NRS6120_13725) | tasA | 2453490..2454275 (-) | 786 | WP_213381649.1 | TasA family protein | - |
| KJP47_RS13195 (NRS6120_13730) | sipW | 2454340..2454912 (-) | 573 | WP_213381733.1 | signal peptidase I | - |
| KJP47_RS13200 (NRS6120_13735) | tapA | 2454896..2455651 (-) | 756 | WP_213381630.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP47_RS13205 (NRS6120_13740) | yqzG | 2455923..2456249 (+) | 327 | WP_026113671.1 | YqzG/YhdC family protein | - |
| KJP47_RS13210 (NRS6120_13745) | spoIIT | 2456291..2456470 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| KJP47_RS13215 (NRS6120_13750) | comGG | 2456541..2456915 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| KJP47_RS13220 (NRS6120_13755) | comGF | 2456916..2457296 (-) | 381 | WP_213381628.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| KJP47_RS13225 (NRS6120_13760) | comGE | 2457322..2457669 (-) | 348 | WP_213381625.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| KJP47_RS13230 (NRS6120_13765) | comGD | 2457653..2458084 (-) | 432 | WP_213381623.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| KJP47_RS13235 (NRS6120_13770) | comGC | 2458074..2458370 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| KJP47_RS13240 (NRS6120_13775) | comGB | 2458384..2459421 (-) | 1038 | WP_121590958.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| KJP47_RS13245 (NRS6120_13780) | comGA | 2459408..2460478 (-) | 1071 | WP_213381621.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KJP47_RS13250 | - | 2460689..2460835 (-) | 147 | WP_282248560.1 | hypothetical protein | - |
| KJP47_RS13255 (NRS6120_13785) | corA | 2460888..2461841 (-) | 954 | WP_087961337.1 | magnesium transporter CorA | - |
| KJP47_RS13260 (NRS6120_13790) | yqhB | 2461983..2463310 (+) | 1328 | Protein_2565 | hemolysin family protein | - |
| KJP47_RS13265 (NRS6120_13795) | rsbRD | 2463363..2464199 (-) | 837 | WP_213381619.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39936.41 Da Isoelectric Point: 9.8617
>NTDB_id=1157754 KJP47_RS13240 WP_121590958.1 2458384..2459421(-) (comGB) [Bacillus subtilis isolate NRS6120]
MKKIRKTWPLKDQARLLKRLGEMTASGYTLLDGLRLMELQMNKKQSADLTDTVTRLREGAPFYQVLKRLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLILFSAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLHAFKHQT
FLPFYRCEAEHVIERLKAGESIEAAICGSPFFETDFSKVISHGQLSGRLDRELYTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
MKKIRKTWPLKDQARLLKRLGEMTASGYTLLDGLRLMELQMNKKQSADLTDTVTRLREGAPFYQVLKRLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLILFSAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLHAFKHQT
FLPFYRCEAEHVIERLKAGESIEAAICGSPFFETDFSKVISHGQLSGRLDRELYTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1157754 KJP47_RS13240 WP_121590958.1 2458384..2459421(-) (comGB) [Bacillus subtilis isolate NRS6120]
ATGAAAAAGATTAGAAAAACCTGGCCGTTAAAGGATCAGGCCCGGTTATTAAAGCGGCTCGGAGAAATGACGGCAAGCGG
ATATACACTTCTGGATGGATTGCGACTGATGGAACTTCAGATGAATAAGAAGCAGTCAGCTGACTTGACTGACACGGTCA
CTCGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGCGTTTGTCATTTCATAAGGAAGCTGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTTGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTCACCGTTGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAATTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGATTCTTTTTTCAGCTGGTATCGGGATTTATTACTGGCTTGTGTTTAAGAA
AAAATCACCTGCCAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCCATTTATGACAGCCTTCATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCAGAACACGTGATTGAACGGCTAAAAGCCGGGGAATCAATTGAAGCTGCTATTTG
TGGGAGCCCTTTTTTTGAAACTGATTTTTCAAAAGTCATATCCCACGGCCAGCTGAGCGGCCGCCTAGATCGTGAGCTTT
ACACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAACCTGGCCGTTAAAGGATCAGGCCCGGTTATTAAAGCGGCTCGGAGAAATGACGGCAAGCGG
ATATACACTTCTGGATGGATTGCGACTGATGGAACTTCAGATGAATAAGAAGCAGTCAGCTGACTTGACTGACACGGTCA
CTCGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGCGTTTGTCATTTCATAAGGAAGCTGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTTGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTCACCGTTGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAATTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGATTCTTTTTTCAGCTGGTATCGGGATTTATTACTGGCTTGTGTTTAAGAA
AAAATCACCTGCCAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCCATTTATGACAGCCTTCATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCAGAACACGTGATTGAACGGCTAAAAGCCGGGGAATCAATTGAAGCTGCTATTTG
TGGGAGCCCTTTTTTTGAAACTGATTTTTCAAAAGTCATATCCCACGGCCAGCTGAGCGGCCGCCTAGATCGTGAGCTTT
ACACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
94.118 |
93.623 |
0.881 |