Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   KJP47_RS02030 Genome accession   NZ_OX419577
Coordinates   382974..383372 (-) Length   132 a.a.
NCBI ID   WP_014478800.1    Uniprot ID   A0A0D1L5A4
Organism   Bacillus subtilis isolate NRS6120     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 377974..388372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP47_RS01995 - 378720..378917 (+) 198 WP_121509395.1 hypothetical protein -
  KJP47_RS02000 yckC 378937..379391 (+) 455 Protein_351 RDD family protein -
  KJP47_RS02005 (NRS6120_02125) yckD 379473..379805 (+) 333 WP_213382693.1 YckD family protein -
  KJP47_RS02010 (NRS6120_02130) - 379933..380355 (+) 423 WP_213382735.1 MarR family transcriptional regulator -
  KJP47_RS02015 (NRS6120_02135) - 380343..380684 (+) 342 WP_032724911.1 DUF3147 family protein -
  KJP47_RS02020 (NRS6120_02140) - 380703..381431 (+) 729 WP_021481826.1 AAA family ATPase -
  KJP47_RS02025 (NRS6120_02145) bglC 381504..382937 (+) 1434 WP_213382691.1 family 1 glycosylhydrolase -
  KJP47_RS02030 (NRS6120_02150) nin/comJ 382974..383372 (-) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  KJP47_RS02035 (NRS6120_02155) nucA/comI 383399..383848 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  KJP47_RS02040 (NRS6120_02160) tlpC 384016..385737 (-) 1722 WP_213382690.1 methyl-accepting chemotaxis protein -
  KJP47_RS02045 (NRS6120_02165) hxlB 385847..386404 (-) 558 WP_017696129.1 6-phospho-3-hexuloisomerase -
  KJP47_RS02050 (NRS6120_02170) hxlA 386410..387042 (-) 633 WP_017696130.1 3-hexulose-6-phosphate synthase -
  KJP47_RS02055 (NRS6120_02175) hxlR 387274..387636 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15006.98 Da        Isoelectric Point: 4.8991

>NTDB_id=1157717 KJP47_RS02030 WP_014478800.1 382974..383372(-) (nin/comJ) [Bacillus subtilis isolate NRS6120]
MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1157717 KJP47_RS02030 WP_014478800.1 382974..383372(-) (nin/comJ) [Bacillus subtilis isolate NRS6120]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TATAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1L5A4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment