Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   KJP51_RS19130 Genome accession   NZ_OX419576
Coordinates   3709511..3709630 (+) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus subtilis isolate NRS6105     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3704511..3714630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP51_RS19110 (NRS6105_18900) albG 3704675..3705376 (+) 702 WP_213379752.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  KJP51_RS19115 (NRS6105_18905) ywhL 3705382..3706758 (-) 1377 WP_213379750.1 YncE family protein -
  KJP51_RS19120 (NRS6105_18910) ywhK 3706797..3708152 (-) 1356 WP_015250986.1 YncE family protein -
  KJP51_RS21100 - 3708149..3708379 (-) 231 WP_041334639.1 hypothetical protein -
  KJP51_RS19125 (NRS6105_18915) rapF 3708382..3709527 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  KJP51_RS19130 (NRS6105_18920) phrF 3709511..3709630 (+) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  KJP51_RS19135 (NRS6105_18925) - 3709883..3710362 (+) 480 WP_015714892.1 hypothetical protein -
  KJP51_RS19140 (NRS6105_18930) - 3710511..3711299 (+) 789 WP_015714893.1 membrane protein -
  KJP51_RS19145 (NRS6105_18935) - 3711286..3711960 (+) 675 WP_015714894.1 hypothetical protein -
  KJP51_RS19150 (NRS6105_18940) - 3711970..3712767 (+) 798 WP_231573542.1 hypothetical protein -
  KJP51_RS19155 (NRS6105_18945) - 3712770..3713417 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  KJP51_RS19160 (NRS6105_18950) - 3713410..3713970 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=1157707 KJP51_RS19130 WP_041334633.1 3709511..3709630(+) (phrF) [Bacillus subtilis isolate NRS6105]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1157707 KJP51_RS19130 WP_041334633.1 3709511..3709630(+) (phrF) [Bacillus subtilis isolate NRS6105]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment