Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SMUFR_RS01985 Genome accession   NZ_CP007016
Coordinates   386726..387451 (+) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans UA159-FR     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 381726..392451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUFR_RS01960 (SMUFR_0349) - 382229..383659 (+) 1431 WP_002262613.1 NCS2 family permease -
  SMUFR_RS01965 (SMUFR_0350) tsaE 383788..384231 (+) 444 WP_002272923.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SMUFR_RS01970 (SMUFR_0351) brpA 384562..385782 (+) 1221 WP_002262611.1 biofilm formation/cell division transcriptional regulator BrpA -
  SMUFR_RS01975 (SMUFR_0352) - 385952..386245 (-) 294 WP_002268777.1 hypothetical protein -
  SMUFR_RS01980 (SMUFR_0353) - 386242..386661 (-) 420 WP_002262609.1 HIT family protein -
  SMUFR_RS01985 (SMUFR_0354) pptA 386726..387451 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  SMUFR_RS01990 (SMUFR_0355) pptB 387454..388488 (+) 1035 WP_002279713.1 ABC transporter permease Regulator
  SMUFR_RS01995 (SMUFR_0356) ccrZ 388547..389329 (+) 783 WP_002262606.1 cell cycle regulator CcrZ -
  SMUFR_RS02000 (SMUFR_0357) trmB 389339..389974 (+) 636 WP_002262605.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SMUFR_RS02010 (SMUFR_0358) rimP 390246..390737 (+) 492 WP_002262604.1 ribosome maturation factor RimP -
  SMUFR_RS02015 (SMUFR_0359) nusA 390773..391966 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  SMUFR_RS02020 (SMUFR_0360) rnpM 391984..392280 (+) 297 WP_002263922.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=115749 SMUFR_RS01985 WP_002262608.1 386726..387451(+) (pptA) [Streptococcus mutans UA159-FR]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=115749 SMUFR_RS01985 WP_002262608.1 386726..387451(+) (pptA) [Streptococcus mutans UA159-FR]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCCTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759

Multiple sequence alignment