Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   KJP64_RS18090 Genome accession   NZ_OX419565
Coordinates   3492699..3493856 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis isolate NRS6145     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3487699..3498856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP64_RS18060 (NRS6145_17850) yvyF 3487952..3488371 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  KJP64_RS18065 (NRS6145_17855) comFC 3488445..3489167 (-) 723 WP_003227991.1 comF operon protein ComFC Machinery gene
  KJP64_RS18070 (NRS6145_17860) comFB 3489131..3489427 (-) 297 WP_003227989.1 late competence protein ComFB -
  KJP64_RS18075 (NRS6145_17865) comFA 3489487..3490878 (-) 1392 WP_003243962.1 ATP-dependent helicase ComFA Machinery gene
  KJP64_RS18080 (NRS6145_17870) fakBA 3490984..3491829 (-) 846 WP_003244125.1 DegV family protein -
  KJP64_RS18085 (NRS6145_17875) degU 3491927..3492616 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  KJP64_RS18090 (NRS6145_17880) degS 3492699..3493856 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  KJP64_RS18095 (NRS6145_17885) yvyE 3494073..3494726 (+) 654 WP_003227979.1 YigZ family protein -
  KJP64_RS18100 (NRS6145_17890) tagV 3494726..3495901 (+) 1176 WP_015251114.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  KJP64_RS18105 (NRS6145_17895) tagO 3495974..3497050 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  KJP64_RS18110 (NRS6145_17900) tuaH 3497195..3498388 (-) 1194 WP_213379941.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1157194 KJP64_RS18090 WP_003227983.1 3492699..3493856(-) (degS) [Bacillus subtilis isolate NRS6145]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1157194 KJP64_RS18090 WP_003227983.1 3492699..3493856(-) (degS) [Bacillus subtilis isolate NRS6145]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment