Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | KJP64_RS12300 | Genome accession | NZ_OX419565 |
| Coordinates | 2400005..2401042 (-) | Length | 345 a.a. |
| NCBI ID | WP_029317912.1 | Uniprot ID | A0A162U359 |
| Organism | Bacillus subtilis isolate NRS6145 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2395005..2406042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP64_RS12250 (NRS6145_12115) | tasA | 2395103..2395888 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| KJP64_RS12255 (NRS6145_12120) | sipW | 2395952..2396524 (-) | 573 | WP_003246088.1 | signal peptidase I | - |
| KJP64_RS12260 (NRS6145_12125) | tapA | 2396508..2397269 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP64_RS12265 (NRS6145_12130) | yqzG | 2397541..2397867 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP64_RS12270 (NRS6145_12135) | spoIIT | 2397909..2398088 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| KJP64_RS12275 (NRS6145_12140) | comGG | 2398159..2398533 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| KJP64_RS12280 | comGF | 2398534..2398917 (-) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| KJP64_RS12285 (NRS6145_12150) | comGE | 2398943..2399290 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| KJP64_RS12290 (NRS6145_12155) | comGD | 2399274..2399705 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| KJP64_RS12295 (NRS6145_12160) | comGC | 2399695..2399991 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| KJP64_RS12300 (NRS6145_12165) | comGB | 2400005..2401042 (-) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| KJP64_RS12305 (NRS6145_12170) | comGA | 2401029..2402099 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| KJP64_RS12310 (NRS6145_12180) | - | 2402312..2402509 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| KJP64_RS12315 (NRS6145_12185) | corA | 2402511..2403464 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| KJP64_RS12320 (NRS6145_12190) | yqhB | 2403607..2404935 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| KJP64_RS12325 (NRS6145_12195) | rsbRD | 2404988..2405824 (-) | 837 | WP_029317909.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39662.10 Da Isoelectric Point: 9.7153
>NTDB_id=1157171 KJP64_RS12300 WP_029317912.1 2400005..2401042(-) (comGB) [Bacillus subtilis isolate NRS6145]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1157171 KJP64_RS12300 WP_029317912.1 2400005..2401042(-) (comGB) [Bacillus subtilis isolate NRS6145]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |