Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   KJP64_RS06095 Genome accession   NZ_OX419565
Coordinates   1178954..1179145 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis isolate NRS6145     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1173954..1184145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP64_RS06065 (NRS6145_05990) argF 1174820..1175779 (+) 960 WP_032721338.1 ornithine carbamoyltransferase -
  KJP64_RS06070 (NRS6145_05995) yjzC 1175865..1176044 (+) 180 WP_003245356.1 YjzC family protein -
  KJP64_RS06075 (NRS6145_06000) yjzD 1176090..1176275 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  KJP64_RS06080 (NRS6145_06005) - 1176524..1177258 (+) 735 WP_003245223.1 hypothetical protein -
  KJP64_RS06085 (NRS6145_06010) - 1177340..1177897 (+) 558 WP_014476424.1 hypothetical protein -
  KJP64_RS06090 (NRS6145_06015) med 1177986..1178939 (+) 954 WP_213379331.1 BMP family ABC transporter substrate-binding protein Regulator
  KJP64_RS06095 (NRS6145_06020) comZ 1178954..1179145 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  KJP64_RS06100 (NRS6145_06025) yjzB 1179175..1179411 (-) 237 WP_213379333.1 spore coat protein YjzB -
  KJP64_RS06105 (NRS6145_06030) fabH 1179576..1180514 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  KJP64_RS06110 (NRS6145_06035) fabF 1180537..1181778 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  KJP64_RS06115 (NRS6145_06040) yjaZ 1181854..1182639 (+) 786 WP_213379337.1 DUF2268 domain-containing protein -
  KJP64_RS06120 (NRS6145_06045) appD 1182829..1183815 (+) 987 WP_213379339.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1157146 KJP64_RS06095 WP_003224559.1 1178954..1179145(+) (comZ) [Bacillus subtilis isolate NRS6145]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1157146 KJP64_RS06095 WP_003224559.1 1178954..1179145(+) (comZ) [Bacillus subtilis isolate NRS6145]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTTTCAATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment