Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   KJP64_RS06090 Genome accession   NZ_OX419565
Coordinates   1177986..1178939 (+) Length   317 a.a.
NCBI ID   WP_213379331.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6145     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1172986..1183939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP64_RS06065 (NRS6145_05990) argF 1174820..1175779 (+) 960 WP_032721338.1 ornithine carbamoyltransferase -
  KJP64_RS06070 (NRS6145_05995) yjzC 1175865..1176044 (+) 180 WP_003245356.1 YjzC family protein -
  KJP64_RS06075 (NRS6145_06000) yjzD 1176090..1176275 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  KJP64_RS06080 (NRS6145_06005) - 1176524..1177258 (+) 735 WP_003245223.1 hypothetical protein -
  KJP64_RS06085 (NRS6145_06010) - 1177340..1177897 (+) 558 WP_014476424.1 hypothetical protein -
  KJP64_RS06090 (NRS6145_06015) med 1177986..1178939 (+) 954 WP_213379331.1 BMP family ABC transporter substrate-binding protein Regulator
  KJP64_RS06095 (NRS6145_06020) comZ 1178954..1179145 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  KJP64_RS06100 (NRS6145_06025) yjzB 1179175..1179411 (-) 237 WP_213379333.1 spore coat protein YjzB -
  KJP64_RS06105 (NRS6145_06030) fabH 1179576..1180514 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  KJP64_RS06110 (NRS6145_06035) fabF 1180537..1181778 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  KJP64_RS06115 (NRS6145_06040) yjaZ 1181854..1182639 (+) 786 WP_213379337.1 DUF2268 domain-containing protein -
  KJP64_RS06120 (NRS6145_06045) appD 1182829..1183815 (+) 987 WP_213379339.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35354.85 Da        Isoelectric Point: 4.5558

>NTDB_id=1157145 KJP64_RS06090 WP_213379331.1 1177986..1178939(+) (med) [Bacillus subtilis isolate NRS6145]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIDKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1157145 KJP64_RS06090 WP_213379331.1 1177986..1178939(+) (med) [Bacillus subtilis isolate NRS6145]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGATAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.369

100

0.994


Multiple sequence alignment