Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   KJP64_RS01960 Genome accession   NZ_OX419565
Coordinates   365349..365747 (-) Length   132 a.a.
NCBI ID   WP_015252845.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6145     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 360349..370747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP64_RS01930 (NRS6145_01920) yckA 361043..361723 (-) 681 WP_213380016.1 amino acid ABC transporter permease -
  KJP64_RS01935 (NRS6145_01925) yckB 361733..362596 (-) 864 WP_009966510.1 transporter substrate-binding domain-containing protein -
  KJP64_RS01940 - 362758..362955 (+) 198 Protein_341 hypothetical protein -
  KJP64_RS01945 (NRS6145_01935) - 362992..363312 (+) 321 Protein_342 RDD family protein -
  KJP64_RS01950 (NRS6145_01940) yckD 363394..363726 (+) 333 WP_213380012.1 YckD family protein -
  KJP64_RS01955 (NRS6145_01945) bglC 363879..365312 (+) 1434 WP_213380010.1 family 1 glycosylhydrolase -
  KJP64_RS01960 (NRS6145_01950) nin/comJ 365349..365747 (-) 399 WP_015252845.1 DNA-entry nuclease inhibitor Regulator
  KJP64_RS01965 (NRS6145_01955) nucA/comI 365774..366223 (-) 450 WP_033883649.1 DNA-entry nuclease Machinery gene
  KJP64_RS01970 (NRS6145_01960) tlpC 366391..368112 (-) 1722 WP_213380008.1 methyl-accepting chemotaxis protein -
  KJP64_RS01975 (NRS6145_01965) hxlB 368223..368780 (-) 558 WP_024572182.1 6-phospho-3-hexuloisomerase -
  KJP64_RS01980 (NRS6145_01970) hxlA 368786..369418 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  KJP64_RS01985 (NRS6145_01975) hxlR 369651..370013 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.86 Da        Isoelectric Point: 4.7078

>NTDB_id=1157125 KJP64_RS01960 WP_015252845.1 365349..365747(-) (nin/comJ) [Bacillus subtilis isolate NRS6145]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1157125 KJP64_RS01960 WP_015252845.1 365349..365747(-) (nin/comJ) [Bacillus subtilis isolate NRS6145]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985

Multiple sequence alignment