Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | KJP48_RS13330 | Genome accession | NZ_OX419564 |
| Coordinates | 2543974..2544309 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis isolate NRS6127 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2538974..2549309
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP48_RS13310 (NRS6127_13225) | gcvT | 2539567..2540655 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KJP48_RS13315 (NRS6127_13230) | yqhH | 2541096..2542769 (+) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| KJP48_RS13320 (NRS6127_13235) | yqhG | 2542790..2543584 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| KJP48_RS13325 (NRS6127_13240) | sinI | 2543767..2543940 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| KJP48_RS13330 (NRS6127_13245) | sinR | 2543974..2544309 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| KJP48_RS13335 (NRS6127_13250) | tasA | 2544402..2545187 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| KJP48_RS13340 (NRS6127_13255) | sipW | 2545251..2545823 (-) | 573 | WP_072692741.1 | signal peptidase I | - |
| KJP48_RS13345 (NRS6127_13260) | tapA | 2545807..2546568 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP48_RS13350 (NRS6127_13265) | yqzG | 2546840..2547166 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP48_RS13355 (NRS6127_13270) | spoIIT | 2547208..2547387 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| KJP48_RS13360 (NRS6127_13275) | comGG | 2547459..2547833 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| KJP48_RS13365 | comGF | 2547834..2548217 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| KJP48_RS13370 (NRS6127_13285) | comGE | 2548243..2548590 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| KJP48_RS13375 (NRS6127_13290) | comGD | 2548574..2549005 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| KJP48_RS13380 (NRS6127_13295) | comGC | 2548995..2549291 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1157081 KJP48_RS13330 WP_003226345.1 2543974..2544309(+) (sinR) [Bacillus subtilis isolate NRS6127]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1157081 KJP48_RS13330 WP_003226345.1 2543974..2544309(+) (sinR) [Bacillus subtilis isolate NRS6127]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |