Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KJP75_RS02190 Genome accession   NZ_OX419560
Coordinates   430634..431584 (+) Length   316 a.a.
NCBI ID   WP_213384308.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6132     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 425634..436584
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP75_RS02165 (NRS6132_02115) rapC 427093..428241 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  KJP75_RS02170 (NRS6132_02120) phrC 428225..428347 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  KJP75_RS02175 (NRS6132_02125) yczM 428447..428536 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  KJP75_RS02180 (NRS6132_02130) yczN 428618..428731 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  KJP75_RS02185 (NRS6132_02135) thrD 428885..430249 (-) 1365 WP_113713033.1 aspartate kinase -
  KJP75_RS02190 (NRS6132_02140) ceuB 430634..431584 (+) 951 WP_213384308.1 ABC transporter permease Machinery gene
  KJP75_RS02195 (NRS6132_02145) yclO 431577..432524 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  KJP75_RS02200 (NRS6132_02150) yclP 432518..433276 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  KJP75_RS02205 (NRS6132_02155) yclQ 433298..434251 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  KJP75_RS02210 (NRS6132_02160) - 434481..435413 (+) 933 WP_014478835.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34845.24 Da        Isoelectric Point: 9.9809

>NTDB_id=1156886 KJP75_RS02190 WP_213384308.1 430634..431584(+) (ceuB) [Bacillus subtilis isolate NRS6132]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPHEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1156886 KJP75_RS02190 WP_213384308.1 430634..431584(+) (ceuB) [Bacillus subtilis isolate NRS6132]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTCATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment