Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | KJP68_RS12400 | Genome accession | NZ_OX419559 |
| Coordinates | 2415959..2416294 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis isolate NRS6099 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2410959..2421294
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP68_RS12380 (NRS6099_12300) | gcvT | 2411552..2412640 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KJP68_RS12385 (NRS6099_12305) | yqhH | 2413081..2414754 (+) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| KJP68_RS12390 (NRS6099_12310) | yqhG | 2414775..2415569 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| KJP68_RS12395 (NRS6099_12315) | sinI | 2415752..2415925 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| KJP68_RS12400 (NRS6099_12320) | sinR | 2415959..2416294 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| KJP68_RS12405 (NRS6099_12325) | tasA | 2416387..2417172 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| KJP68_RS12410 (NRS6099_12330) | sipW | 2417236..2417808 (-) | 573 | WP_072692741.1 | signal peptidase I | - |
| KJP68_RS12415 (NRS6099_12335) | tapA | 2417792..2418553 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP68_RS12420 (NRS6099_12340) | yqzG | 2418825..2419151 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP68_RS12425 (NRS6099_12345) | spoIIT | 2419193..2419372 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| KJP68_RS12430 (NRS6099_12350) | comGG | 2419444..2419818 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| KJP68_RS12435 | comGF | 2419819..2420202 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| KJP68_RS12440 (NRS6099_12360) | comGE | 2420228..2420575 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| KJP68_RS12445 (NRS6099_12365) | comGD | 2420559..2420990 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| KJP68_RS12450 (NRS6099_12370) | comGC | 2420980..2421276 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1156837 KJP68_RS12400 WP_003226345.1 2415959..2416294(+) (sinR) [Bacillus subtilis isolate NRS6099]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1156837 KJP68_RS12400 WP_003226345.1 2415959..2416294(+) (sinR) [Bacillus subtilis isolate NRS6099]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
ACAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
ACAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |