Detailed information NTG1156554

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP78_RS20520
• Genome accession: NZ_OX419553
• Coordinates: 3896497..3897642 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6183
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3891497..3902642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP78_RS20500 (NRS6183_20310)	albF	3891513..3892793 (+)	1281	WP_029726079.1	pitrilysin family protein	-
KJP78_RS20505 (NRS6183_20315)	albG	3892790..3893491 (+)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KJP78_RS20510 (NRS6183_20320)	ywhL	3893497..3894873 (-)	1377	WP_015250987.1	YncE family protein	-
KJP78_RS20515 (NRS6183_20325)	ywhK	3894912..3896267 (-)	1356	WP_213416684.1	YncE family protein	-
KJP78_RS22375	-	3896264..3896494 (-)	231	WP_326256832.1	hypothetical protein	-
KJP78_RS20520 (NRS6183_20330)	rapF	3896497..3897642 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
KJP78_RS20525 (NRS6183_20335)	phrF	3897626..3897745 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
KJP78_RS20530 (NRS6183_20340)	ywhH	3897861..3898309 (+)	449	Protein_3989	YbaK/EbsC family protein	-
KJP78_RS20535 (NRS6183_20345)	speB	3898340..3899212 (-)	873	WP_198878426.1	agmatinase	-
KJP78_RS20540 (NRS6183_20350)	speE	3899273..3900103 (-)	831	WP_003227543.1	spermidine synthase	-
KJP78_RS20545 (NRS6183_20355)	pbpG	3900305..3902380 (+)	2076	WP_046664002.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=1156554 KJP78_RS20520 WP_029318693.1 3896497..3897642(+) (rapF) [Bacillus subtilis isolate NRS6183]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1156554 KJP78_RS20520 WP_029318693.1 3896497..3897642(+) (rapF) [Bacillus subtilis isolate NRS6183]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATAGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572