Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   KJP53_RS19350 Genome accession   NZ_OX419551
Coordinates   3736142..3736261 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis isolate NRS6190     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3731142..3741261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP53_RS19330 (NRS6190_19150) albG 3731306..3732007 (+) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  KJP53_RS19335 (NRS6190_19155) ywhL 3732013..3733389 (-) 1377 WP_003244415.1 YncE family protein -
  KJP53_RS19340 (NRS6190_19160) ywhK 3733428..3734783 (-) 1356 WP_003227552.1 YncE family protein -
  KJP53_RS21725 - 3734780..3735010 (-) 231 WP_009968328.1 hypothetical protein -
  KJP53_RS19345 (NRS6190_19165) rapF 3735013..3736158 (+) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  KJP53_RS19350 (NRS6190_19170) phrF 3736142..3736261 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  KJP53_RS19355 (NRS6190_19175) ywhH 3736360..3736833 (+) 474 WP_003227547.1 YbaK/EbsC family protein -
  KJP53_RS19360 (NRS6190_19180) speB 3736865..3737737 (-) 873 WP_003227545.1 agmatinase -
  KJP53_RS19365 (NRS6190_19185) speE 3737798..3738628 (-) 831 WP_003227543.1 spermidine synthase -
  KJP53_RS19370 (NRS6190_19190) pbpG 3738830..3740905 (+) 2076 WP_003227540.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1156474 KJP53_RS19350 WP_009968329.1 3736142..3736261(+) (phrF) [Bacillus subtilis isolate NRS6190]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1156474 KJP53_RS19350 WP_009968329.1 3736142..3736261(+) (phrF) [Bacillus subtilis isolate NRS6190]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment