Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QNH68_RS08090 Genome accession   NZ_OX352944
Coordinates   1675632..1676366 (-) Length   244 a.a.
NCBI ID   WP_002939204.1    Uniprot ID   A0A0K2E869
Organism   Streptococcus suis isolate 861160_LM_H     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1670632..1681366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH68_RS08060 - 1670860..1671156 (-) 297 WP_002942375.1 YlxR family protein -
  QNH68_RS08065 nusA 1671173..1672315 (-) 1143 WP_013730553.1 transcription termination factor NusA -
  QNH68_RS08070 rimP 1672388..1672858 (-) 471 WP_002942369.1 ribosome maturation factor RimP -
  QNH68_RS08075 trmB 1673116..1673754 (-) 639 WP_002939002.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QNH68_RS08080 - 1673751..1674545 (-) 795 WP_013730554.1 phosphotransferase family protein -
  QNH68_RS08085 - 1674595..1675635 (-) 1041 WP_013730555.1 ABC transporter permease -
  QNH68_RS08090 pptA 1675632..1676366 (-) 735 WP_002939204.1 ABC transporter ATP-binding protein Regulator
  QNH68_RS08095 - 1676429..1676842 (+) 414 WP_002939203.1 HIT family protein -
  QNH68_RS08100 - 1676844..1677146 (+) 303 WP_002939199.1 hypothetical protein -
  QNH68_RS08105 - 1677255..1678448 (-) 1194 WP_044666811.1 LCP family protein -
  QNH68_RS08110 - 1678445..1678972 (-) 528 WP_002939196.1 GNAT family N-acetyltransferase -
  QNH68_RS08115 tsaE 1678965..1679405 (-) 441 WP_024376437.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QNH68_RS08120 - 1679506..1681170 (-) 1665 WP_074400592.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26760.04 Da        Isoelectric Point: 4.3999

>NTDB_id=1155588 QNH68_RS08090 WP_002939204.1 1675632..1676366(-) (pptA) [Streptococcus suis isolate 861160_LM_H]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLGEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=1155588 QNH68_RS08090 WP_002939204.1 1675632..1676366(-) (pptA) [Streptococcus suis isolate 861160_LM_H]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAAGGACAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTATTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGATTTAATCGCTCTTTTGGGGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTCCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K2E869

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721

Multiple sequence alignment