Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ONG87_RS01450 Genome accession   NZ_OX352319
Coordinates   318848..319237 (+) Length   129 a.a.
NCBI ID   WP_264382080.1    Uniprot ID   -
Organism   Pseudomonas sp. MM227     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 313848..324237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ONG87_RS01425 (AHFPHNDE_00282) pyrR 314816..315334 (-) 519 WP_122480504.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ONG87_RS01430 (AHFPHNDE_00283) ruvX 315636..316076 (-) 441 WP_122480503.1 Holliday junction resolvase RuvX -
  ONG87_RS01435 (AHFPHNDE_00284) - 316076..316645 (-) 570 WP_122480502.1 YqgE/AlgH family protein -
  ONG87_RS01440 (AHFPHNDE_00285) - 316707..317612 (-) 906 WP_264382079.1 energy transducer TonB -
  ONG87_RS01445 (AHFPHNDE_00286) gshB 317702..318655 (-) 954 WP_122795940.1 glutathione synthase -
  ONG87_RS01450 (AHFPHNDE_00287) pilG 318848..319237 (+) 390 WP_264382080.1 PleD family two-component system response regulator Regulator
  ONG87_RS01455 (AHFPHNDE_00288) pilH 319292..319657 (+) 366 WP_122480669.1 twitching motility response regulator PilH -
  ONG87_RS01460 (AHFPHNDE_00289) - 319667..320206 (+) 540 WP_185794914.1 chemotaxis protein CheW -
  ONG87_RS01465 (AHFPHNDE_00290) - 320265..322322 (+) 2058 WP_122480497.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 129 a.a.        Molecular weight: 14125.43 Da        Isoelectric Point: 6.9525

>NTDB_id=1155273 ONG87_RS01450 WP_264382080.1 318848..319237(+) (pilG) [Pseudomonas sp. MM227]
MKTSEAFKIMVIDDSKTIRRSAELLLEQAGCQVITALDGFDALAKIVDERPDIIFIDVMMPRLDGYQTCALLKSNSGFSA
IPVVMLSSRDGLFDKARGRSVGSDQFLTKPFSKQELLAAIRTHVPGFAA

Nucleotide


Download         Length: 390 bp        

>NTDB_id=1155273 ONG87_RS01450 WP_264382080.1 318848..319237(+) (pilG) [Pseudomonas sp. MM227]
ATGAAAACGTCCGAAGCCTTCAAGATCATGGTGATCGACGACTCCAAGACGATTCGTCGCAGCGCCGAACTGTTGCTCGA
ACAGGCAGGCTGCCAAGTGATCACCGCACTCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACGAACGTCCCGATATCA
TCTTCATTGATGTCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCGCTGCTCAAGAGCAACAGCGGCTTCAGCGCC
ATTCCGGTGGTGATGTTGTCGTCGCGCGATGGCCTGTTCGACAAGGCTCGCGGCCGCAGTGTCGGCTCGGATCAATTTTT
GACCAAGCCCTTCAGCAAGCAAGAACTGCTCGCCGCGATCCGCACCCATGTGCCGGGTTTCGCCGCGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.333

93.023

0.636
  vicR Streptococcus mutans UA159

41.88

90.698

0.38

Multiple sequence alignment