Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   QML72_RS07485 Genome accession   NZ_OX346411
Coordinates   1493885..1495153 (-) Length   422 a.a.
NCBI ID   WP_282007600.1    Uniprot ID   -
Organism   Enterococcus cecorum isolate CIRMBP-1287     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1488885..1500153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QML72_RS07480 (CIRMBP1287_01492) - 1492273..1493868 (-) 1596 WP_168931985.1 His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein -
  QML72_RS07485 (CIRMBP1287_01493) eeP 1493885..1495153 (-) 1269 WP_282007600.1 RIP metalloprotease RseP Regulator
  QML72_RS07490 (CIRMBP1287_01494) - 1495286..1495756 (-) 471 WP_282007601.1 DUF234 domain-containing protein -
  QML72_RS07495 (CIRMBP1287_01495) - 1495872..1496678 (-) 807 WP_087214484.1 phosphatidate cytidylyltransferase -
  QML72_RS07500 (CIRMBP1287_01496) - 1496679..1497476 (-) 798 WP_047242474.1 isoprenyl transferase -
  QML72_RS07505 (CIRMBP1287_01497) - 1497618..1499321 (-) 1704 WP_047242473.1 hypothetical protein -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46554.37 Da        Isoelectric Point: 5.3033

>NTDB_id=1155253 QML72_RS07485 WP_282007600.1 1493885..1495153(-) (eeP) [Enterococcus cecorum isolate CIRMBP-1287]
MKSILVFLIIFSVIVIVHEFGHFYFARKSGILVREFSIGMGPKVFAKQGKDGVAYTIRLLPLGGYVRMAGADEGGDLTPG
MFISLVVDENNVVHKMNCCEKVELENSIPFEVADSDLEDELYVEGYVNGEDSKLVRFAVDHDATVIESDGTEIRIAPRDV
QFQSAKLWQRMLTNFAGPLNNFILTFVLCVILVFMQGGMSDPNTSKLGEIMPDSPASQAGLKQGDEIKTIADKKISNWND
LVDEIQKNPGKSLEVKYTRDGQTKTTTLTPKTVTVNDEKVGQIGITMYKKTGLMTMITGGFEVSINMATQIFQALKSIIV
QPDINKLGGPVAIFQQSAQVANEGLITIIAYMALISVNIGIFNLLPIPALDGGKLVLNILEAIRRKPLKPEHEGIITMIG
VGMILLLFVLVTWNDIQRMFFR

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1155253 QML72_RS07485 WP_282007600.1 1493885..1495153(-) (eeP) [Enterococcus cecorum isolate CIRMBP-1287]
ATGAAATCGATTCTAGTTTTTTTGATTATCTTTTCAGTCATTGTCATTGTTCATGAGTTTGGACATTTTTATTTTGCACG
TAAATCTGGTATTTTAGTGCGTGAATTTTCTATCGGAATGGGGCCTAAAGTCTTTGCTAAACAAGGAAAAGATGGGGTTG
CCTATACGATTCGCTTACTTCCATTAGGCGGCTATGTGCGAATGGCCGGTGCGGATGAAGGTGGCGATTTAACACCAGGG
ATGTTTATTTCATTAGTAGTAGATGAAAATAATGTGGTGCACAAGATGAATTGCTGCGAAAAAGTGGAATTGGAAAATAG
TATTCCTTTTGAGGTTGCCGATAGTGATTTAGAAGATGAACTTTATGTAGAAGGCTATGTCAATGGAGAGGATAGCAAGC
TTGTGCGTTTTGCCGTCGATCATGATGCAACGGTGATTGAATCTGATGGTACGGAGATTCGCATCGCACCACGAGATGTA
CAATTCCAGTCAGCTAAATTATGGCAACGTATGCTTACCAATTTTGCTGGTCCGTTAAATAATTTCATCTTAACTTTTGT
CTTGTGTGTGATTTTGGTCTTTATGCAAGGTGGGATGAGTGATCCTAATACTTCAAAATTGGGTGAGATTATGCCTGATT
CACCTGCTAGTCAAGCTGGATTGAAACAAGGCGATGAAATCAAAACGATTGCTGACAAGAAAATCAGCAATTGGAATGAT
TTGGTAGATGAAATTCAAAAAAATCCAGGGAAATCGCTTGAAGTCAAATATACACGTGATGGTCAAACCAAAACAACAAC
CTTAACACCTAAAACTGTGACGGTCAATGATGAAAAAGTAGGTCAAATTGGGATTACCATGTATAAGAAAACAGGTCTGA
TGACGATGATTACTGGAGGATTTGAAGTTTCAATCAATATGGCCACTCAGATTTTCCAAGCTTTGAAATCAATTATTGTT
CAGCCTGATATTAATAAGTTAGGTGGTCCAGTAGCGATTTTCCAACAATCTGCGCAGGTAGCCAATGAAGGTCTCATTAC
GATTATTGCGTATATGGCGTTGATTTCAGTGAATATTGGGATTTTTAATTTACTCCCAATTCCAGCCTTAGATGGTGGGA
AGCTTGTATTAAATATTTTAGAAGCGATTCGTCGCAAACCCTTAAAGCCAGAACACGAAGGTATTATTACCATGATTGGT
GTAGGGATGATTTTATTGCTCTTTGTTTTAGTCACTTGGAATGATATTCAAAGGATGTTTTTTAGATAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-407)

PDZ domain (PDZ_2)

(209-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.837

100

0.498
  eeP Streptococcus thermophilus LMG 18311

48.598

100

0.493

Multiple sequence alignment