Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   QML63_RS06960 Genome accession   NZ_OX346406
Coordinates   1391320..1392588 (-) Length   422 a.a.
NCBI ID   WP_087214528.1    Uniprot ID   -
Organism   Enterococcus cecorum isolate CIRMBP-1212     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1386320..1397588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QML63_RS06955 (CIRMBP1212_01386) - 1389708..1391303 (-) 1596 WP_168931985.1 His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein -
  QML63_RS06960 (CIRMBP1212_01387) eeP 1391320..1392588 (-) 1269 WP_087214528.1 RIP metalloprotease RseP Regulator
  QML63_RS06965 (CIRMBP1212_01388) - 1392749..1393192 (-) 444 WP_282013454.1 DUF234 domain-containing protein -
  QML63_RS06970 (CIRMBP1212_01389) - 1393309..1394115 (-) 807 WP_087662871.1 phosphatidate cytidylyltransferase -
  QML63_RS06975 (CIRMBP1212_01390) - 1394116..1394913 (-) 798 WP_047342680.1 isoprenyl transferase -
  QML63_RS06980 (CIRMBP1212_01391) - 1395053..1396867 (-) 1815 WP_282013455.1 sulfatase-like hydrolase/transferase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46539.36 Da        Isoelectric Point: 5.5006

>NTDB_id=1155127 QML63_RS06960 WP_087214528.1 1391320..1392588(-) (eeP) [Enterococcus cecorum isolate CIRMBP-1212]
MKSILVFLIIFSVIVIVHEFGHFYFARKSGILVREFSIGMGPKVFAKQGKDGVAYTIRLLPLGGYVRMAGADEGGDLTPG
MFISLVVDENNVVHKMNCCEKVELENSIPFEVADSDLEDELYVEGYVNGEDSKLVRFAVDHDATVIESDGTEIRIAPRDV
QFQSAKLWQRMLTNFAGPLNNFILTFVLCVILVFMQGGMSDPNTSKLGEIMPDSPASQAGLKQGDEIKTIANKKISNWND
LVDEIQKNPGKSLEVKYTRDGQTKTTTLTPKTVTVNDEKVGQIGITMYKKTGVMTMITGGFEVSINMATQIFQALKSIIV
QPDINKLGGPVAIFQQSAQVANEGLITIIAYMALISVNIGIFNLLPIPALDGGKLVLNILEAIRRKPLKPEHEGIITMIG
VGMILLLFVLVTWNDIQRMFFR

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1155127 QML63_RS06960 WP_087214528.1 1391320..1392588(-) (eeP) [Enterococcus cecorum isolate CIRMBP-1212]
ATGAAATCGATTCTAGTATTTTTGATTATCTTTTCAGTTATCGTCATTGTTCATGAGTTTGGACATTTTTATTTTGCACG
TAAATCTGGTATTTTAGTGCGTGAATTTTCTATCGGGATGGGTCCGAAAGTCTTTGCCAAACAAGGAAAAGATGGGGTGG
CCTATACGATTCGCTTGCTTCCATTAGGTGGCTATGTGCGAATGGCCGGTGCGGATGAAGGTGGCGATTTAACACCAGGG
ATGTTTATTTCATTAGTAGTAGATGAAAATAATGTGGTGCACAAGATGAATTGCTGCGAAAAAGTGGAATTGGAAAATAG
TATTCCGTTTGAGGTTGCCGATAGTGATTTAGAAGATGAACTTTATGTAGAAGGCTATGTCAATGGAGAGGATAGCAAGC
TTGTACGTTTTGCTGTCGATCATGATGCGACGGTGATTGAATCTGATGGTACGGAAATTCGCATCGCACCACGAGATGTA
CAATTCCAGTCAGCTAAATTATGGCAACGTATGCTTACCAATTTTGCTGGTCCGTTAAATAATTTCATCTTAACTTTTGT
CTTGTGTGTGATTTTGGTCTTTATGCAAGGTGGGATGAGTGATCCTAATACTTCAAAATTAGGTGAGATTATGCCTGATT
CACCTGCTAGTCAAGCTGGATTGAAACAAGGCGATGAAATCAAAACGATTGCTAACAAGAAAATCAGCAATTGGAATGAT
TTGGTAGATGAAATTCAAAAAAATCCAGGGAAATCGCTTGAAGTCAAATATACACGTGATGGTCAAACCAAAACAACAAC
CTTAACACCTAAAACTGTGACGGTCAATGATGAAAAAGTGGGTCAAATTGGGATCACCATGTATAAGAAAACTGGTGTGA
TGACAATGATTACAGGTGGTTTTGAAGTGTCGATAAATATGGCCACTCAGATTTTCCAAGCTTTGAAATCAATCATTGTC
CAGCCTGATATTAATAAGTTAGGTGGCCCAGTAGCGATTTTCCAACAATCTGCGCAGGTAGCCAATGAAGGTCTCATTAC
GATTATTGCGTATATGGCATTGATTTCAGTGAATATTGGGATTTTTAATTTACTCCCAATTCCAGCCTTAGATGGTGGGA
AGCTCGTATTAAATATTTTAGAAGCGATTCGTCGCAAACCCTTAAAGCCAGAACACGAAGGTATTATTACCATGATTGGT
GTAGGGATGATTTTATTGCTCTTTGTTTTAGTCACTTGGAATGATATTCAAAGGATGTTTTTTAGATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(209-268)

Peptidase family M50 (Peptidase_M50)

(7-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.605

100

0.495
  eeP Streptococcus thermophilus LMG 18311

48.364

100

0.491

Multiple sequence alignment