Detailed information
Bioinformatically predicted
Overview
| Name | recC | Type | Machinery gene |
| Locus tag | OGY80_RS08875 | Genome accession | NZ_OX336253 |
| Coordinates | 1833635..1836934 (+) | Length | 1099 a.a. |
| NCBI ID | WP_263340723.1 | Uniprot ID | - |
| Organism | Neisseria sp. Marseille-Q5346 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1828635..1841934
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OGY80_RS08850 | comM | 1828925..1830421 (-) | 1497 | WP_263340712.1 | YifB family Mg chelatase-like AAA ATPase | Machinery gene |
| OGY80_RS08855 | - | 1830435..1830755 (-) | 321 | WP_003684455.1 | accessory factor UbiK family protein | - |
| OGY80_RS08860 | metK | 1830865..1832034 (-) | 1170 | WP_070583688.1 | methionine adenosyltransferase | - |
| OGY80_RS08865 | - | 1832427..1833305 (+) | 879 | WP_263340721.1 | lysophospholipid acyltransferase family protein | - |
| OGY80_RS08875 | recC | 1833635..1836934 (+) | 3300 | WP_263340723.1 | exodeoxyribonuclease V subunit gamma | Machinery gene |
| OGY80_RS08880 | - | 1836938..1837444 (+) | 507 | WP_263340727.1 | thioredoxin family protein | - |
| OGY80_RS08885 | lapB | 1837559..1838728 (-) | 1170 | WP_003745547.1 | lipopolysaccharide assembly protein LapB | - |
| OGY80_RS08890 | - | 1838754..1839077 (-) | 324 | WP_263340732.1 | lipopolysaccharide assembly protein LapA domain-containing protein | - |
| OGY80_RS08895 | ilvE | 1839291..1840289 (+) | 999 | WP_101755255.1 | branched-chain-amino-acid transaminase | - |
Sequence
Protein
Download Length: 1099 a.a. Molecular weight: 125292.93 Da Isoelectric Point: 4.5649
>NTDB_id=1154769 OGY80_RS08875 WP_263340723.1 1833635..1836934(+) (recC) [Neisseria sp. Marseille-Q5346]
MFYLYQSDRLEALAEMCAHIHQTLPLDSVLAQEEVVVQSQGMRRYLNVFFARKLGVAANLKFSLPAGLAWQLMRKLVPDV
PPLSPFSPEVMRWRLLDLFRSEAFQTAPEYENVRLKLESYLHSSASADYQLAGQMADIFDQYLVYRPDWIDAWQAGKLLG
LGDDEDWQARLWRYLDDGSQSAPHRVALWEKLLAQLDKSVLPQRLFVFGISTMAPMYLQLLHQISKHCDVFVFALNPSSQ
YWGEVIDEAQILKRGDEADLSQAGHPLLASLGKQGRDFFDFLSEVETEQDIQVYEEGKDDTLLHCLQNDIQNLIMPSERL
YQQEEGEAGAQPALVQVHDADGNPVCVEPDKLLNDGSVKIVAAHSPLRELQILKEELSLVLQNNPDWQPHDIAVLTPNIE
PYSPFIEAVFGQEHAGSQALPYSISDVKLSRRQPLLYALAQTLDLLESRFEVDKVLPLLESRLVLQRFGLSEEDVPLLHE
TVAGLNVHWGLDQTMREGKDNLFTWQQAIERLTLGWMLPEGSNGMWQGVSAWHSNVNQLDVFSGFAEFIRTLADMAAQWQ
EPADVESWVQRCRDLLEKLFAPDMDDQYAKQQFEQSLAKWQEEAQLAEFDGLLPCETVIRHIRRFLDSESQAGFLSGGIT
FCSMVPMRSLPFKMVCLLGLNDGDFPRNTKAAVFDLIAKHPKKGDRARRDDDRYLFLEALISAREMLYLSYIGRDIRNDA
EFAPSSLISELLDTIAAMTGKSGRELTEKWVKYHPLQAFSRRYFQKDALSDGLFSTRQDYADALNQPQAEAQPFFLEVLS
QEEPDKTIHQDELISFWRNPVKVWLKKNLSWDQPYLDGAWESAEPFEPQHGGRIADAYLDARRKGEDFEDTAIRLNVESL
MPVGELGGLWQKQYQISAKNVDAELIRSNKRPSEPYEESFDDLVLQGTIGNLYECGRIVFLNQKDNAPNRIARLLEHLIF
CAIAPKSVANRQTYMVSLGQTETYAAIEQQTAKELLKEWLVYFRIGQNTPLSFFAKTSLAAAEEYNKKEDWDTALRKAYD
VFNGNKMSKAQKEYTEVKLVFGHSEESPLDEPLFENLVVNLLVPLLTGVAGKTDTTEQE
MFYLYQSDRLEALAEMCAHIHQTLPLDSVLAQEEVVVQSQGMRRYLNVFFARKLGVAANLKFSLPAGLAWQLMRKLVPDV
PPLSPFSPEVMRWRLLDLFRSEAFQTAPEYENVRLKLESYLHSSASADYQLAGQMADIFDQYLVYRPDWIDAWQAGKLLG
LGDDEDWQARLWRYLDDGSQSAPHRVALWEKLLAQLDKSVLPQRLFVFGISTMAPMYLQLLHQISKHCDVFVFALNPSSQ
YWGEVIDEAQILKRGDEADLSQAGHPLLASLGKQGRDFFDFLSEVETEQDIQVYEEGKDDTLLHCLQNDIQNLIMPSERL
YQQEEGEAGAQPALVQVHDADGNPVCVEPDKLLNDGSVKIVAAHSPLRELQILKEELSLVLQNNPDWQPHDIAVLTPNIE
PYSPFIEAVFGQEHAGSQALPYSISDVKLSRRQPLLYALAQTLDLLESRFEVDKVLPLLESRLVLQRFGLSEEDVPLLHE
TVAGLNVHWGLDQTMREGKDNLFTWQQAIERLTLGWMLPEGSNGMWQGVSAWHSNVNQLDVFSGFAEFIRTLADMAAQWQ
EPADVESWVQRCRDLLEKLFAPDMDDQYAKQQFEQSLAKWQEEAQLAEFDGLLPCETVIRHIRRFLDSESQAGFLSGGIT
FCSMVPMRSLPFKMVCLLGLNDGDFPRNTKAAVFDLIAKHPKKGDRARRDDDRYLFLEALISAREMLYLSYIGRDIRNDA
EFAPSSLISELLDTIAAMTGKSGRELTEKWVKYHPLQAFSRRYFQKDALSDGLFSTRQDYADALNQPQAEAQPFFLEVLS
QEEPDKTIHQDELISFWRNPVKVWLKKNLSWDQPYLDGAWESAEPFEPQHGGRIADAYLDARRKGEDFEDTAIRLNVESL
MPVGELGGLWQKQYQISAKNVDAELIRSNKRPSEPYEESFDDLVLQGTIGNLYECGRIVFLNQKDNAPNRIARLLEHLIF
CAIAPKSVANRQTYMVSLGQTETYAAIEQQTAKELLKEWLVYFRIGQNTPLSFFAKTSLAAAEEYNKKEDWDTALRKAYD
VFNGNKMSKAQKEYTEVKLVFGHSEESPLDEPLFENLVVNLLVPLLTGVAGKTDTTEQE
Nucleotide
Download Length: 3300 bp
>NTDB_id=1154769 OGY80_RS08875 WP_263340723.1 1833635..1836934(+) (recC) [Neisseria sp. Marseille-Q5346]
ATGTTTTATCTTTATCAGTCCGACCGTTTGGAAGCGCTTGCCGAAATGTGCGCGCATATTCATCAGACCTTGCCCTTGGA
TTCTGTATTGGCGCAGGAAGAAGTGGTGGTGCAGAGCCAGGGGATGCGGCGGTATCTGAATGTGTTTTTTGCGCGCAAAC
TCGGCGTGGCGGCGAATTTGAAGTTCAGCCTGCCGGCCGGTTTGGCGTGGCAGCTGATGCGTAAATTGGTTCCCGATGTG
CCGCCGCTCAGCCCGTTTTCGCCTGAGGTCATGCGTTGGCGTTTGCTGGATTTGTTCCGCAGCGAAGCGTTTCAGACGGC
CCCGGAATACGAAAACGTGCGCTTGAAGCTGGAAAGTTATTTGCATAGCTCGGCCTCGGCGGATTATCAGCTTGCCGGAC
AGATGGCGGATATTTTCGACCAATATTTGGTGTACCGCCCGGATTGGATTGATGCGTGGCAGGCTGGGAAGCTGCTGGGT
TTGGGCGATGATGAGGATTGGCAGGCGCGGCTGTGGCGTTATTTGGATGATGGCAGCCAATCTGCGCCGCACCGCGTGGC
CTTGTGGGAAAAGCTGTTGGCGCAGTTGGATAAATCGGTCTTGCCGCAAAGGTTGTTTGTATTCGGCATTTCGACAATGG
CGCCGATGTATCTGCAACTGCTGCATCAAATTTCCAAGCATTGCGATGTGTTTGTGTTTGCACTCAATCCGAGCAGCCAA
TATTGGGGCGAGGTCATCGACGAGGCGCAGATTTTGAAAAGGGGCGATGAGGCGGATTTGTCGCAGGCAGGGCATCCGCT
GTTGGCTTCTTTGGGCAAGCAGGGGCGCGATTTCTTTGATTTTCTGTCGGAAGTGGAAACCGAGCAGGATATTCAGGTTT
ATGAAGAAGGAAAAGACGATACCTTGTTGCATTGCCTGCAAAACGATATCCAAAACTTAATCATGCCGTCTGAACGCTTA
TATCAACAGGAAGAAGGCGAAGCAGGCGCGCAGCCGGCTTTGGTTCAGGTTCACGATGCGGACGGCAATCCAGTGTGTGT
CGAGCCGGACAAGCTGTTGAATGACGGCTCCGTCAAAATCGTTGCGGCACACAGCCCTTTGCGCGAATTGCAGATTTTGA
AAGAAGAGCTGTCGCTGGTGTTGCAAAATAATCCCGATTGGCAACCGCACGATATTGCCGTGTTAACACCGAACATCGAG
CCGTACAGTCCGTTTATCGAAGCCGTTTTTGGACAGGAGCATGCAGGCAGTCAGGCTTTGCCGTATTCGATTTCGGATGT
GAAGCTCAGCCGCCGTCAGCCGTTGCTGTATGCTTTGGCTCAAACTTTGGACTTGCTGGAGAGCCGGTTTGAAGTGGACA
AGGTTTTGCCTTTGCTGGAAAGCCGGTTGGTGCTGCAACGCTTCGGTTTGAGCGAGGAAGATGTGCCGCTGCTGCATGAG
ACTGTTGCAGGATTGAATGTGCATTGGGGTTTGGATCAAACCATGCGCGAGGGCAAAGACAACCTCTTTACTTGGCAGCA
GGCGATAGAGCGTTTGACCTTGGGCTGGATGCTGCCTGAAGGCAGCAACGGCATGTGGCAGGGCGTGAGTGCGTGGCATA
GCAACGTCAACCAGTTGGACGTGTTCAGCGGTTTTGCCGAATTTATCCGTACTTTGGCCGATATGGCGGCGCAATGGCAA
GAGCCTGCCGATGTGGAAAGTTGGGTGCAGCGTTGCCGTGATTTACTGGAGAAACTGTTTGCTCCGGATATGGACGACCA
ATACGCCAAGCAGCAGTTCGAGCAGTCTTTGGCGAAATGGCAGGAAGAGGCGCAGTTGGCCGAATTTGACGGATTGTTGC
CGTGTGAAACCGTTATCCGCCATATCCGCCGCTTCTTGGACAGCGAAAGCCAAGCCGGATTTTTGAGCGGCGGCATCACT
TTTTGCAGTATGGTGCCGATGCGCAGCCTGCCGTTTAAAATGGTTTGCCTGTTGGGTTTGAATGACGGCGATTTTCCACG
CAATACCAAAGCGGCGGTGTTCGACCTGATTGCCAAACATCCGAAAAAAGGCGACCGTGCCCGCCGCGACGACGACCGTT
ATCTCTTCCTCGAAGCCTTAATTAGCGCACGCGAAATGCTGTATTTGTCTTATATCGGCCGCGATATACGCAATGATGCC
GAGTTTGCGCCGTCTTCGTTAATCAGCGAGCTGCTGGATACCATTGCCGCCATGACAGGGAAAAGCGGGCGCGAGTTGAC
GGAGAAATGGGTGAAATATCATCCGTTGCAGGCCTTTTCACGCCGTTATTTCCAAAAGGACGCGCTTTCAGACGGCCTCT
TCAGTACGCGCCAAGATTACGCTGATGCGTTGAACCAACCGCAAGCGGAAGCGCAGCCGTTTTTCCTTGAGGTATTAAGT
CAGGAAGAGCCGGACAAGACCATTCATCAAGACGAGCTCATCAGTTTTTGGCGCAACCCTGTCAAAGTTTGGCTGAAGAA
AAATTTAAGCTGGGATCAGCCGTATCTGGACGGCGCATGGGAGTCTGCCGAACCGTTTGAGCCGCAACATGGAGGTCGGA
TTGCCGATGCCTATTTGGATGCGCGGCGCAAAGGGGAAGATTTTGAAGATACGGCCATTCGGCTGAATGTAGAAAGTCTG
ATGCCGGTAGGCGAGTTGGGCGGTTTGTGGCAGAAGCAGTATCAGATATCTGCGAAAAACGTGGATGCCGAGTTGATACG
CAGCAACAAAAGGCCGTCTGAACCTTATGAAGAATCCTTTGACGACTTGGTGTTACAAGGCACCATCGGCAATCTTTACG
AATGCGGCCGCATTGTGTTCCTAAACCAAAAAGACAATGCACCCAACCGCATTGCTCGTTTATTGGAGCATTTGATTTTT
TGCGCCATTGCCCCTAAATCCGTTGCAAACCGACAAACCTATATGGTCAGCTTGGGGCAGACCGAAACCTATGCCGCCAT
CGAGCAACAAACAGCAAAAGAACTTTTGAAAGAATGGCTGGTATATTTCCGAATCGGACAAAATACCCCCTTGTCATTTT
TTGCCAAAACCAGTCTTGCCGCTGCGGAGGAGTACAACAAGAAAGAGGATTGGGATACTGCCTTGAGAAAAGCCTATGAT
GTTTTTAACGGCAATAAAATGAGCAAAGCGCAGAAAGAATATACCGAAGTGAAGCTGGTGTTTGGTCATTCGGAAGAATC
GCCTCTTGATGAGCCGTTATTTGAAAACCTTGTCGTCAATCTGCTTGTGCCGCTTTTGACTGGCGTGGCAGGGAAAACCG
ATACAACAGAACAGGAGTGA
ATGTTTTATCTTTATCAGTCCGACCGTTTGGAAGCGCTTGCCGAAATGTGCGCGCATATTCATCAGACCTTGCCCTTGGA
TTCTGTATTGGCGCAGGAAGAAGTGGTGGTGCAGAGCCAGGGGATGCGGCGGTATCTGAATGTGTTTTTTGCGCGCAAAC
TCGGCGTGGCGGCGAATTTGAAGTTCAGCCTGCCGGCCGGTTTGGCGTGGCAGCTGATGCGTAAATTGGTTCCCGATGTG
CCGCCGCTCAGCCCGTTTTCGCCTGAGGTCATGCGTTGGCGTTTGCTGGATTTGTTCCGCAGCGAAGCGTTTCAGACGGC
CCCGGAATACGAAAACGTGCGCTTGAAGCTGGAAAGTTATTTGCATAGCTCGGCCTCGGCGGATTATCAGCTTGCCGGAC
AGATGGCGGATATTTTCGACCAATATTTGGTGTACCGCCCGGATTGGATTGATGCGTGGCAGGCTGGGAAGCTGCTGGGT
TTGGGCGATGATGAGGATTGGCAGGCGCGGCTGTGGCGTTATTTGGATGATGGCAGCCAATCTGCGCCGCACCGCGTGGC
CTTGTGGGAAAAGCTGTTGGCGCAGTTGGATAAATCGGTCTTGCCGCAAAGGTTGTTTGTATTCGGCATTTCGACAATGG
CGCCGATGTATCTGCAACTGCTGCATCAAATTTCCAAGCATTGCGATGTGTTTGTGTTTGCACTCAATCCGAGCAGCCAA
TATTGGGGCGAGGTCATCGACGAGGCGCAGATTTTGAAAAGGGGCGATGAGGCGGATTTGTCGCAGGCAGGGCATCCGCT
GTTGGCTTCTTTGGGCAAGCAGGGGCGCGATTTCTTTGATTTTCTGTCGGAAGTGGAAACCGAGCAGGATATTCAGGTTT
ATGAAGAAGGAAAAGACGATACCTTGTTGCATTGCCTGCAAAACGATATCCAAAACTTAATCATGCCGTCTGAACGCTTA
TATCAACAGGAAGAAGGCGAAGCAGGCGCGCAGCCGGCTTTGGTTCAGGTTCACGATGCGGACGGCAATCCAGTGTGTGT
CGAGCCGGACAAGCTGTTGAATGACGGCTCCGTCAAAATCGTTGCGGCACACAGCCCTTTGCGCGAATTGCAGATTTTGA
AAGAAGAGCTGTCGCTGGTGTTGCAAAATAATCCCGATTGGCAACCGCACGATATTGCCGTGTTAACACCGAACATCGAG
CCGTACAGTCCGTTTATCGAAGCCGTTTTTGGACAGGAGCATGCAGGCAGTCAGGCTTTGCCGTATTCGATTTCGGATGT
GAAGCTCAGCCGCCGTCAGCCGTTGCTGTATGCTTTGGCTCAAACTTTGGACTTGCTGGAGAGCCGGTTTGAAGTGGACA
AGGTTTTGCCTTTGCTGGAAAGCCGGTTGGTGCTGCAACGCTTCGGTTTGAGCGAGGAAGATGTGCCGCTGCTGCATGAG
ACTGTTGCAGGATTGAATGTGCATTGGGGTTTGGATCAAACCATGCGCGAGGGCAAAGACAACCTCTTTACTTGGCAGCA
GGCGATAGAGCGTTTGACCTTGGGCTGGATGCTGCCTGAAGGCAGCAACGGCATGTGGCAGGGCGTGAGTGCGTGGCATA
GCAACGTCAACCAGTTGGACGTGTTCAGCGGTTTTGCCGAATTTATCCGTACTTTGGCCGATATGGCGGCGCAATGGCAA
GAGCCTGCCGATGTGGAAAGTTGGGTGCAGCGTTGCCGTGATTTACTGGAGAAACTGTTTGCTCCGGATATGGACGACCA
ATACGCCAAGCAGCAGTTCGAGCAGTCTTTGGCGAAATGGCAGGAAGAGGCGCAGTTGGCCGAATTTGACGGATTGTTGC
CGTGTGAAACCGTTATCCGCCATATCCGCCGCTTCTTGGACAGCGAAAGCCAAGCCGGATTTTTGAGCGGCGGCATCACT
TTTTGCAGTATGGTGCCGATGCGCAGCCTGCCGTTTAAAATGGTTTGCCTGTTGGGTTTGAATGACGGCGATTTTCCACG
CAATACCAAAGCGGCGGTGTTCGACCTGATTGCCAAACATCCGAAAAAAGGCGACCGTGCCCGCCGCGACGACGACCGTT
ATCTCTTCCTCGAAGCCTTAATTAGCGCACGCGAAATGCTGTATTTGTCTTATATCGGCCGCGATATACGCAATGATGCC
GAGTTTGCGCCGTCTTCGTTAATCAGCGAGCTGCTGGATACCATTGCCGCCATGACAGGGAAAAGCGGGCGCGAGTTGAC
GGAGAAATGGGTGAAATATCATCCGTTGCAGGCCTTTTCACGCCGTTATTTCCAAAAGGACGCGCTTTCAGACGGCCTCT
TCAGTACGCGCCAAGATTACGCTGATGCGTTGAACCAACCGCAAGCGGAAGCGCAGCCGTTTTTCCTTGAGGTATTAAGT
CAGGAAGAGCCGGACAAGACCATTCATCAAGACGAGCTCATCAGTTTTTGGCGCAACCCTGTCAAAGTTTGGCTGAAGAA
AAATTTAAGCTGGGATCAGCCGTATCTGGACGGCGCATGGGAGTCTGCCGAACCGTTTGAGCCGCAACATGGAGGTCGGA
TTGCCGATGCCTATTTGGATGCGCGGCGCAAAGGGGAAGATTTTGAAGATACGGCCATTCGGCTGAATGTAGAAAGTCTG
ATGCCGGTAGGCGAGTTGGGCGGTTTGTGGCAGAAGCAGTATCAGATATCTGCGAAAAACGTGGATGCCGAGTTGATACG
CAGCAACAAAAGGCCGTCTGAACCTTATGAAGAATCCTTTGACGACTTGGTGTTACAAGGCACCATCGGCAATCTTTACG
AATGCGGCCGCATTGTGTTCCTAAACCAAAAAGACAATGCACCCAACCGCATTGCTCGTTTATTGGAGCATTTGATTTTT
TGCGCCATTGCCCCTAAATCCGTTGCAAACCGACAAACCTATATGGTCAGCTTGGGGCAGACCGAAACCTATGCCGCCAT
CGAGCAACAAACAGCAAAAGAACTTTTGAAAGAATGGCTGGTATATTTCCGAATCGGACAAAATACCCCCTTGTCATTTT
TTGCCAAAACCAGTCTTGCCGCTGCGGAGGAGTACAACAAGAAAGAGGATTGGGATACTGCCTTGAGAAAAGCCTATGAT
GTTTTTAACGGCAATAAAATGAGCAAAGCGCAGAAAGAATATACCGAAGTGAAGCTGGTGTTTGGTCATTCGGAAGAATC
GCCTCTTGATGAGCCGTTATTTGAAAACCTTGTCGTCAATCTGCTTGTGCCGCTTTTGACTGGCGTGGCAGGGAAAACCG
ATACAACAGAACAGGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recC | Neisseria gonorrhoeae strain FA1090 |
64.564 |
98.089 |
0.633 |