Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   OGY80_RS05465 Genome accession   NZ_OX336253
Coordinates   1154135..1154830 (-) Length   231 a.a.
NCBI ID   WP_263338704.1    Uniprot ID   -
Organism   Neisseria sp. Marseille-Q5346     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1149135..1159830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OGY80_RS05455 ccsA 1151598..1152410 (-) 813 WP_003749434.1 cytochrome c biogenesis protein CcsA -
  OGY80_RS05460 ffh 1152592..1153962 (+) 1371 WP_263338701.1 signal recognition particle protein -
  OGY80_RS05465 dsbA2 1154135..1154830 (-) 696 WP_263338704.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  OGY80_RS05470 - 1155001..1157112 (-) 2112 WP_263338706.1 TonB-dependent receptor -
  OGY80_RS05475 - 1157273..1157806 (-) 534 WP_263338709.1 alpha/beta hydrolase -
  OGY80_RS05480 - 1157817..1158161 (-) 345 WP_070608462.1 hypothetical protein -
  OGY80_RS05485 - 1158148..1158927 (-) 780 WP_263338713.1 exodeoxyribonuclease III -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25388.89 Da        Isoelectric Point: 5.3625

>NTDB_id=1154754 OGY80_RS05465 WP_263338704.1 1154135..1154830(-) (dsbA2) [Neisseria sp. Marseille-Q5346]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSNTSAPSAPAALTEGVNYTVLSNPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=1154754 OGY80_RS05465 WP_263338704.1 1154135..1154830(-) (dsbA2) [Neisseria sp. Marseille-Q5346]
ATGAAACTGAAAACCTTAGCCTTGACCTCATTAACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCGGAAACCAGCGT
TCCGGCAGACAGCGCCCAAAGCAACACATCCGCTCCGTCAGCCCCTGCCGCATTGACCGAAGGTGTCAATTACACCGTAT
TGTCCAATCCGATTCCGCAACAGCAGGCCGGCAAAATCGAAGTATTGGAATTCTTCGGCTACTTCTGCCCGCATTGTGCC
CATTTGGAGCCGGTTTTGAGCGAACACATTAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTTGTTTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGTTGTCTGAGCAAACTGCATTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCGCCCGAAAGCCAAGCACGTGCGGCCCAAATGGAAGAATTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTTGGTGGCAAATATCAAGTTGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGACCAGTTGGTGGACAAAGTACGCGAAGAGCAGAAAAAGCCACAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.97

100

0.97

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment