Detailed information NTG1152584

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: NBW44_RS01400
• Genome accession: NZ_OW724079
• Coordinates: 255637..256869 (+)
• Length: 410 a.a.
• NCBI ID: WP_250306899.1
• Uniprot ID: -
• Organism: Streptococcus sp. Marseille-Q3533
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 250637..261869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NBW44_RS01385	-	252350..254131 (+)	1782	WP_075566650.1	ABC transporter ATP-binding protein	-
NBW44_RS01390	-	254281..254799 (+)	519	WP_075566652.1	Dps family protein	-
NBW44_RS01395	-	254929..255435 (+)	507	WP_250306898.1	dihydrofolate reductase	-
NBW44_RS01400	clpX	255637..256869 (+)	1233	WP_250306899.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
NBW44_RS01405	yihA	256878..257465 (+)	588	WP_250306900.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
NBW44_RS01410	-	257475..257855 (+)	381	WP_142558026.1	RidA family protein	-
NBW44_RS01415	rapZ	257907..258797 (+)	891	WP_250306901.1	RNase adapter RapZ	-
NBW44_RS01420	-	258794..259771 (+)	978	WP_075566670.1	YvcK family protein	-
NBW44_RS01425	whiA	259768..260679 (+)	912	WP_142558020.1	DNA-binding protein WhiA	-
NBW44_RS01430	-	260714..261682 (-)	969	WP_250306902.1	NAD(P)/FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45639.07 Da
• Isoelectric Point: 4.3665

>NTDB_id=1152584 NBW44_RS01400 WP_250306899.1 255637..256869(+) (clpX) [Streptococcus sp. Marseille-Q3533]
MPTNRKNDMMVYCSFCGKSQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLTDLSEVPKPIELLNILNNYVIGQDR
AKRALAVAVYNHYKRINFHDNREESEDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPKNALVKQYQTLLSYDDVDLEFDDEALQEIANKAIERKTGARGLRSIIEETMLDIMFEVPSQEDVKTVRITKEAVD
GTDKPILETA

Nucleotide

• Length: 1233 bp

>NTDB_id=1152584 NBW44_RS01400 WP_250306899.1 255637..256869(+) (clpX) [Streptococcus sp. Marseille-Q3533]
ATGCCGACAAATAGAAAAAATGATATGATGGTTTATTGCTCGTTTTGTGGCAAGAGCCAAGATGAAGTACAAAAAATTAT
AGCAGGTAATAATGCTTTTATCTGTAATGAATGTGTGGAGCTAGCTCAGGAGATTATCCGTGAAGAGTTGGCAGAGGAAG
TTTTAACAGATCTTTCAGAAGTTCCAAAACCAATTGAACTTCTCAACATTTTAAATAATTATGTCATCGGTCAAGATCGT
GCTAAACGTGCCTTGGCTGTTGCGGTTTATAACCACTATAAACGAATCAACTTCCACGATAATCGTGAAGAATCAGAAGA
CGTGGACCTACAAAAGTCTAATATTTTGATGATTGGCCCAACTGGTTCAGGAAAGACTTTCTTAGCTCAAACCTTAGCTA
AAAGCTTGAATGTACCTTTTGCTATCGCTGATGCAACAGCTTTAACGGAAGCTGGCTATGTAGGTGAAGACGTAGAGAAT
ATACTTCTCAAACTCTTGCAGGCAGCTGACTTCAACATCGAGCGAGCTGAGCGTGGAATTATCTACGTTGATGAAATAGA
CAAGATTGCTAAGAAGAGTGAGAATGTTTCCATCACACGTGATGTTTCTGGTGAAGGTGTTCAACAAGCCCTTCTTAAGA
TTATCGAAGGTACAGTAGCAAGTGTGCCTCCACAAGGTGGACGTAAGCATCCGCAACAAGAGATGATCCAAGTAGATACA
AAAAATATTCTCTTCATTGTAGGTGGTGCCTTTGATGGGATCGAGGAAATTGTCAAACAGCGTTTGGGTGAAAAAGTCAT
TGGTTTCGGACAAAACAATAAGGCCATTGATGAAAATAGTTCTTATATGCAAGAAATCATCGCCGAAGATATTCAGAAAT
TCGGTATTATTCCTGAATTAATTGGACGCTTGCCGGTATTTGCTGCTTTAGAGCAATTAACAGTGGATGATTTGGTTCGT
ATCTTGAAAGAGCCGAAGAATGCCTTGGTTAAACAGTATCAAACCTTGCTTTCTTATGATGATGTTGACCTTGAATTTGA
TGATGAAGCACTCCAAGAGATTGCTAACAAGGCTATTGAACGTAAGACAGGTGCCCGTGGTCTTCGCTCTATCATCGAAG
AAACTATGTTAGACATCATGTTTGAAGTACCAAGTCAAGAAGATGTGAAAACAGTACGTATCACAAAAGAAGCAGTCGAT
GGAACGGATAAGCCGATCCTCGAAACAGCCTAG

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (313-391)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	87.317	100	0.873
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.96	98.049	0.568