Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   MMH06_RS02710 Genome accession   NZ_OV904788
Coordinates   515112..515870 (-) Length   252 a.a.
NCBI ID   WP_000410376.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain RMV7 isolate RMV7domi     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 510112..520870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMH06_RS02685 (IONPJBJN_00525) - 510244..510495 (+) 252 WP_000644292.1 hypothetical protein -
  MMH06_RS02690 (IONPJBJN_00526) - 511114..511533 (+) 420 WP_000187319.1 DUF1492 domain-containing protein -
  MMH06_RS02695 (IONPJBJN_00527) - 511984..512178 (-) 195 WP_000285194.1 DUF951 family protein -
  MMH06_RS02700 (IONPJBJN_00528) dnaN 512243..513379 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  MMH06_RS02705 (IONPJBJN_00529) dnaA 513538..514899 (-) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  MMH06_RS02710 (IONPJBJN_00530) spo0J 515112..515870 (-) 759 WP_000410376.1 ParB/RepB/Spo0J family partition protein Regulator
  MMH06_RS02715 (IONPJBJN_00531) htrA 515928..517109 (-) 1182 WP_000681597.1 trypsin-like peptidase domain-containing protein Regulator
  MMH06_RS02720 (IONPJBJN_00532) rlmH 517292..517771 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  MMH06_RS02730 (IONPJBJN_00534) comC/comC1 518053..518178 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  MMH06_RS02735 (IONPJBJN_00535) comD/comD1 518199..519524 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  MMH06_RS02740 (IONPJBJN_00536) comE 519521..520273 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29130.48 Da        Isoelectric Point: 8.0022

>NTDB_id=1152070 MMH06_RS02710 WP_000410376.1 515112..515870(-) (spo0J) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEACAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1152070 MMH06_RS02710 WP_000410376.1 515112..515870(-) (spo0J) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCATG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAACTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504

Multiple sequence alignment