Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | P3C28_RS05995 | Genome accession | NZ_OU532558 |
| Coordinates | 1137846..1138148 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni isolate | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1132846..1143148
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3C28_RS05970 (CJ121364_001161) | rpsR | 1133209..1133469 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| P3C28_RS05975 (CJ121364_001162) | lon | 1133529..1135904 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| P3C28_RS05980 (CJ121364_001163) | - | 1135921..1136568 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| P3C28_RS05985 (CJ121364_001164) | fliW | 1136729..1137118 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| P3C28_RS05990 (CJ121364_001165) | proC | 1137118..1137849 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| P3C28_RS05995 (CJ121364_001166) | ctsT | 1137846..1138148 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| P3C28_RS06000 (CJ121364_001167) | - | 1138145..1138807 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| P3C28_RS06005 (CJ121364_001168) | - | 1138804..1139256 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| P3C28_RS06010 (CJ121364_001169) | hemD | 1139253..1139882 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| P3C28_RS06015 (CJ121364_001170) | thiE | 1139860..1140492 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| P3C28_RS06020 (CJ121364_001171) | thiD | 1140482..1141294 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| P3C28_RS06025 (CJ121364_001172) | - | 1141291..1141977 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| P3C28_RS06030 (CJ121364_001173) | - | 1141974..1142735 (-) | 762 | WP_032585146.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1151301 P3C28_RS05995 WP_002853046.1 1137846..1138148(+) (ctsT) [Campylobacter jejuni isolate]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1151301 P3C28_RS05995 WP_002853046.1 1137846..1138148(+) (ctsT) [Campylobacter jejuni isolate]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |