Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE1441   Type   Regulator
Locus tag   PJ19_RS01800 Genome accession   NZ_CP010072
Coordinates   339994..340647 (-) Length   217 a.a.
NCBI ID   WP_011049930.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain 01-1512     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 334994..345647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJ19_RS01760 (PJ19_01760) - 335213..335662 (+) 450 WP_043012737.1 hypothetical protein -
  PJ19_RS01765 (PJ19_01765) - 335675..336310 (+) 636 WP_002789149.1 DUF4376 domain-containing protein -
  PJ19_RS01770 (PJ19_01770) - 336307..336771 (+) 465 WP_002801917.1 hypothetical protein -
  PJ19_RS01775 (PJ19_01775) - 336761..337132 (+) 372 WP_002801918.1 DUF1353 domain-containing protein -
  PJ19_RS01780 (PJ19_01780) - 337129..338412 (+) 1284 WP_002801920.1 hypothetical protein -
  PJ19_RS01785 (PJ19_01785) - 338461..338919 (+) 459 WP_043012738.1 DUF5675 family protein -
  PJ19_RS01790 (PJ19_01790) - 339148..339567 (+) 420 WP_002870261.1 hypothetical protein -
  PJ19_RS09910 - 339485..339682 (+) 198 WP_002913413.1 hypothetical protein -
  PJ19_RS01795 (PJ19_01795) - 339696..339977 (-) 282 WP_002870263.1 PLDc N-terminal domain-containing protein -
  PJ19_RS01800 (PJ19_01800) CJE1441 339994..340647 (-) 654 WP_011049930.1 DNA/RNA non-specific endonuclease Regulator
  PJ19_RS01805 (PJ19_01805) - 340653..341315 (-) 663 WP_002870274.1 S24/S26 family peptidase -
  PJ19_RS01810 (PJ19_01810) - 341550..342203 (-) 654 WP_002870336.1 hypothetical protein -
  PJ19_RS01815 (PJ19_01815) - 342407..342610 (+) 204 WP_002858450.1 hypothetical protein -
  PJ19_RS01820 (PJ19_01820) - 342607..342891 (+) 285 WP_002788580.1 hypothetical protein -
  PJ19_RS01825 (PJ19_01825) - 343322..344053 (+) 732 WP_002801548.1 phage regulatory protein/antirepressor Ant -
  PJ19_RS01830 (PJ19_01830) - 344106..344393 (+) 288 WP_002787279.1 YopX family protein -
  PJ19_RS01835 (PJ19_01835) - 344450..344713 (+) 264 WP_002787281.1 hypothetical protein -
  PJ19_RS01840 (PJ19_01840) - 344679..344909 (+) 231 WP_002787283.1 hypothetical protein -

Sequence


Protein


Download         Length: 217 a.a.        Molecular weight: 25531.02 Da        Isoelectric Point: 9.8742

>NTDB_id=115033 PJ19_RS01800 WP_011049930.1 339994..340647(-) (CJE1441) [Campylobacter jejuni subsp. jejuni strain 01-1512]
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF

Nucleotide


Download         Length: 654 bp        

>NTDB_id=115033 PJ19_RS01800 WP_011049930.1 339994..340647(-) (CJE1441) [Campylobacter jejuni subsp. jejuni strain 01-1512]
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

100

100

1

  CJE0566 Campylobacter jejuni RM1221

91.163

99.078

0.903