Detailed information NTG1150296

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: HUW69_RS16015
• Genome accession: NZ_LT992491
• Coordinates: 545897..548467 (+)
• Length: 856 a.a.
• NCBI ID: WP_174566656.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain 4295STDY6534200
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 540897..553467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUW69_RS15980 (SAMEA4374365_03242)	-	540928..541179 (-)	252	WP_002031501.1	YgjV family protein	-
HUW69_RS15985 (SAMEA4374365_03243)	-	541591..541911 (-)	321	WP_001089529.1	DUF496 family protein	-
HUW69_RS15990 (SAMEA4374365_03244)	-	542100..542297 (+)	198	WP_001246072.1	hypothetical protein	-
HUW69_RS15995 (SAMEA4374365_03245)	-	542339..542989 (+)	651	WP_001025626.1	YceH family protein	-
HUW69_RS16000 (SAMEA4374365_03246)	-	543006..543311 (+)	306	WP_000429063.1	GIY-YIG nuclease family protein	-
HUW69_RS16005 (SAMEA4374365_03247)	traF	543413..544573 (+)	1161	WP_001025495.1	conjugal transfer protein TraF	-
HUW69_RS16010 (SAMEA4374365_03248)	luxP	544785..545879 (+)	1095	WP_001925355.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
HUW69_RS16015 (SAMEA4374365_03249)	luxQ	545897..548467 (+)	2571	WP_174566656.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
HUW69_RS16020 (SAMEA4374365_03250)	-	548459..549124 (-)	666	WP_000268202.1	PilZ domain-containing protein	-
HUW69_RS16025 (SAMEA4374365_03251)	-	549370..549888 (-)	519	WP_029627619.1	hypothetical protein	-
HUW69_RS16030 (SAMEA4374365_03252)	-	550125..550520 (-)	396	WP_029627618.1	YgiW/YdeI family stress tolerance OB fold protein	-
HUW69_RS16035 (SAMEA4374365_03253)	-	550728..551033 (+)	306	WP_032471892.1	hypothetical protein	-
HUW69_RS16040 (SAMEA4374365_03254)	-	551579..552619 (+)	1041	WP_084997948.1	hypothetical protein	-

Sequence

Protein

• Length: 856 a.a.
• Molecular weight: 96946.91 Da
• Isoelectric Point: 5.9579

>NTDB_id=1150296 HUW69_RS16015 WP_174566656.1 545897..548467(+) (luxQ) [Vibrio cholerae strain 4295STDY6534200]
MDIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSIQTSSLIQSLFDFRLAALRIHQDSTAK
NASLLNALVSRDSSRLDEFFSSVDELELSNAPDLRFISSQDQILWDDGNASFYGIVLQELNKLMRKVAISGNWHLVQTSD
DGKPVHLLMRRSSLIQAGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLTVDTTPLVSTLKGNEPYSLDYVVHSAK
DAMRDSFIVGQTFLEVESVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALISMIAVSIASRWWLQKRIQREIETLMNYTHK
LMDLDTKSQFAGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTITKAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCNEKGLELVVNSNITTATIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGEPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKADAQQLLPAPD
PQPLFDKALRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLHL
PVVVYACTADGLEETRQAFFHAGVEYVLVKPLKEQTLHKALEHFKHHHCEKNAGLN

Nucleotide

• Length: 2571 bp

>NTDB_id=1150296 HUW69_RS16015 WP_174566656.1 545897..548467(+) (luxQ) [Vibrio cholerae strain 4295STDY6534200]
TTGGACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCCTCATTTATCACCCATGCCGTCGTCGTAGTGATGGG
CGTACTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGCAGCCGCTTGATGGCTCAGGAAGGGCAACGCACCTCAA
TTCAAACCTCTAGCTTAATTCAAAGTTTGTTTGATTTTCGTCTTGCTGCACTAAGAATTCATCAAGACAGCACAGCCAAG
AACGCCAGTTTACTCAACGCACTTGTCAGCCGAGATTCGAGTCGGCTTGATGAGTTTTTTTCCAGTGTCGATGAACTTGA
ACTCTCTAATGCGCCGGATCTGCGTTTTATCTCCAGTCAAGATCAAATCTTGTGGGATGATGGCAACGCTTCTTTCTATG
GGATTGTATTGCAAGAACTGAATAAGCTTATGCGTAAAGTCGCGATCAGTGGCAATTGGCATTTGGTTCAAACGTCTGAC
GATGGTAAACCCGTGCATTTGTTGATGCGTCGCTCGTCACTGATTCAGGCGGGAACGGGGCAGGTTGTCGGGTATCTCTA
TGTGGGGATTGTGCTTAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACTTAGTCCTAA
CGGTAGACACCACCCCACTGGTTTCCACGTTGAAAGGCAATGAACCTTATTCGTTAGACTACGTGGTGCATAGCGCCAAA
GATGCCATGCGAGACAGCTTTATTGTTGGGCAAACTTTTTTAGAAGTGGAAAGTGTACCGACCTATCTGTGTGTCTACTC
GATTCAAACCAACCAAAATGTGCTCACTCTACGAGATAATTTCTATTTTTGGATGGCGTTTGCGCTGATCAGTATGATTG
CTGTCTCCATAGCGTCACGCTGGTGGTTACAAAAACGCATTCAGCGTGAAATCGAAACCCTGATGAATTACACCCACAAA
TTGATGGATCTGGACACCAAGAGCCAGTTTGCTGGCTCTAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTCTCACCGACCATGCTTTGGA
ATACCTCTGGTCGGCTGATCCGCATGAACCCGTCAGCACAGATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTACTACCGACCATCACTAAGGCGGCACAGGGCAATAATCCGAGTGACGTTACAACCGA
AGTGGATGGTCGCGTGTACCGCTGGAACCTTTCACCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAGGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAACAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCAGCACGGGTCAGG
GCCGAGTTTTTGGCTAAAATGAGTCACGAACTGCGCACGCCGCTCAATGGTGTGCTCGGTGTTTCCCAACTGCTAAAACG
GACCCCACTCAATGATGAACAGCGCGAACACGTGGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCAGTGCTGAATG
ACATCTTGGATTTCTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGTTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTAATGAAAAAGGTTTGGAACTGGTGGTGAACTCCAATATCACCACTGCTAC
CATTGTGCGCAGCGATCAGATCCGGATTAACCAAATTTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTTGAATTGCAATTAATTGAAGGCGAACCGCTAGCACAGTTGGTAATTCAAGTCGTCGATACGGGGATT
GGTATCCGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAAGCTGAGTCCACCACGACGCGCGAGTACGGTGG
AAGTGGTTTGGGCTTAACGATTGTGCACAGCTTAGTGGAAATGCTCAGTGGCCAACTGCACGTGAGCTCTGAATATGGCA
TCGGTACACGTTTTGAAATTCAATTACCGATTGAGCTAGTGGAAAAGGCAGATGCGCAGCAATTGTTACCGGCTCCTGAT
CCTCAACCGTTATTTGATAAAGCTCTACGTGTATTGCTGGTGGAGGATAACCACACCAACGCCTTTATTGCTCAAGCATT
TTGTCGCAAATATGGCTTAGATGTGAGTTGGGTAACGGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGACTACG
ACTTAGTGCTGATGGATAACCAGTTACCCTATCTGGATGGTGTTGAGACCACGCGCACCATCAAAAAAGTGCTGCACCTT
CCGGTGGTGGTGTATGCCTGCACTGCAGATGGCTTAGAAGAAACACGGCAGGCATTTTTCCATGCTGGCGTGGAATATGT
GTTAGTGAAGCCGCTGAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAACATCATCATTGCGAAAAAAACGCAG
GCTTAAATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (731-841)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	96.733	100	0.968