Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | HUW69_RS16010 | Genome accession | NZ_LT992491 |
| Coordinates | 544785..545879 (+) | Length | 364 a.a. |
| NCBI ID | WP_001925355.1 | Uniprot ID | - |
| Organism | Vibrio cholerae strain 4295STDY6534200 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 539785..550879
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUW69_RS15980 (SAMEA4374365_03242) | - | 540928..541179 (-) | 252 | WP_002031501.1 | YgjV family protein | - |
| HUW69_RS15985 (SAMEA4374365_03243) | - | 541591..541911 (-) | 321 | WP_001089529.1 | DUF496 family protein | - |
| HUW69_RS15990 (SAMEA4374365_03244) | - | 542100..542297 (+) | 198 | WP_001246072.1 | hypothetical protein | - |
| HUW69_RS15995 (SAMEA4374365_03245) | - | 542339..542989 (+) | 651 | WP_001025626.1 | YceH family protein | - |
| HUW69_RS16000 (SAMEA4374365_03246) | - | 543006..543311 (+) | 306 | WP_000429063.1 | GIY-YIG nuclease family protein | - |
| HUW69_RS16005 (SAMEA4374365_03247) | traF | 543413..544573 (+) | 1161 | WP_001025495.1 | conjugal transfer protein TraF | - |
| HUW69_RS16010 (SAMEA4374365_03248) | luxP | 544785..545879 (+) | 1095 | WP_001925355.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| HUW69_RS16015 (SAMEA4374365_03249) | luxQ | 545897..548467 (+) | 2571 | WP_174566656.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | Regulator |
| HUW69_RS16020 (SAMEA4374365_03250) | - | 548459..549124 (-) | 666 | WP_000268202.1 | PilZ domain-containing protein | - |
| HUW69_RS16025 (SAMEA4374365_03251) | - | 549370..549888 (-) | 519 | WP_029627619.1 | hypothetical protein | - |
| HUW69_RS16030 (SAMEA4374365_03252) | - | 550125..550520 (-) | 396 | WP_029627618.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
Sequence
Protein
Download Length: 364 a.a. Molecular weight: 41302.03 Da Isoelectric Point: 6.7046
>NTDB_id=1150295 HUW69_RS16010 WP_001925355.1 544785..545879(+) (luxP) [Vibrio cholerae strain 4295STDY6534200]
MKRRLIFPLFLMAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQKQPIIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHESGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDIMVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKTVPLVYSGDFEIVTKQDSAARVTELKARAFRYSDR
MKRRLIFPLFLMAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQKQPIIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHESGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDIMVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKTVPLVYSGDFEIVTKQDSAARVTELKARAFRYSDR
Nucleotide
Download Length: 1095 bp
>NTDB_id=1150295 HUW69_RS16010 WP_001925355.1 544785..545879(+) (luxP) [Vibrio cholerae strain 4295STDY6534200]
ATGAAAAGAAGGCTAATATTCCCGCTGTTTCTGATGGCAGCGCTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGCGCGTTGACGGTGGCGCAAAAGCAACCCATCATTATTTCGGTGGTCTACCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGACGCTTTAGGGATTCGCTATCAAATCAACCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCTTTGATGGAAGCGCTCAAAAATAAGAGTGACTATCTGATCTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAACATGTGCTGCACTCTTCTGAAACCAAGTTGATTTTGCAAAATATC
ACGACACCAGTGAAAGATTGGCAAGGTAAGCAGCCTATGATGTACATCGGCTTTGATCATGAGTCCGGCGCGCAATTATT
AGCGCAATATTACCAAGCACATGCCCCTAAAAAGCCTTATTCAGTACTCTATTTTTCCGAGGGGTATATCAGTGAAGCAC
GAGGGGATACCTTCATCCAAGATATGAATGCGGTACACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
GGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAACCGACAAGATATTATGGTCAATGGTTGGGGCGGAGGCTCGGCTG
AATTGGAAGCGCTTGCTAAAGGCGAGTTGGATGTCACTGTAATGCGCATGAATGACGATACCGGCGTTGCCATGGCTGAA
GCGATAAAATGGGATTTGGAAGGAAAAACCGTACCTTTGGTGTATTCGGGCGATTTTGAAATTGTCACCAAGCAAGATTC
CGCTGCACGTGTTACAGAACTGAAAGCCCGGGCTTTCCGTTATTCAGATCGTTAG
ATGAAAAGAAGGCTAATATTCCCGCTGTTTCTGATGGCAGCGCTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGCGCGTTGACGGTGGCGCAAAAGCAACCCATCATTATTTCGGTGGTCTACCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGACGCTTTAGGGATTCGCTATCAAATCAACCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCTTTGATGGAAGCGCTCAAAAATAAGAGTGACTATCTGATCTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAACATGTGCTGCACTCTTCTGAAACCAAGTTGATTTTGCAAAATATC
ACGACACCAGTGAAAGATTGGCAAGGTAAGCAGCCTATGATGTACATCGGCTTTGATCATGAGTCCGGCGCGCAATTATT
AGCGCAATATTACCAAGCACATGCCCCTAAAAAGCCTTATTCAGTACTCTATTTTTCCGAGGGGTATATCAGTGAAGCAC
GAGGGGATACCTTCATCCAAGATATGAATGCGGTACACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
GGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAACCGACAAGATATTATGGTCAATGGTTGGGGCGGAGGCTCGGCTG
AATTGGAAGCGCTTGCTAAAGGCGAGTTGGATGTCACTGTAATGCGCATGAATGACGATACCGGCGTTGCCATGGCTGAA
GCGATAAAATGGGATTTGGAAGGAAAAACCGTACCTTTGGTGTATTCGGGCGATTTTGAAATTGTCACCAAGCAAGATTC
CGCTGCACGTGTTACAGAACTGAAAGCCCGGGCTTTCCGTTATTCAGATCGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
96.978 |
100 |
0.97 |