Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   DXE36_RS06940 Genome accession   NZ_LT992469
Coordinates   1307213..1308199 (-) Length   328 a.a.
NCBI ID   WP_000959279.1    Uniprot ID   A0A2S6DCY7
Organism   Staphylococcus aureus isolate 15_LA_305     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1302213..1313199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE36_RS06915 - 1302473..1302820 (-) 348 WP_001242104.1 hypothetical protein -
  DXE36_RS06920 - 1303006..1303599 (+) 594 WP_000224612.1 CYTH domain-containing protein -
  DXE36_RS06925 - 1303703..1304068 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  DXE36_RS06930 yjbH 1304091..1304897 (+) 807 WP_000896695.1 protease adaptor protein YjbH -
  DXE36_RS06935 pepF 1305357..1307165 (-) 1809 WP_000082727.1 oligoendopeptidase F -
  DXE36_RS06940 coiA 1307213..1308199 (-) 987 WP_000959279.1 competence protein CoiA Machinery gene
  DXE36_RS06945 mecA 1308320..1309039 (-) 720 WP_001217731.1 adaptor protein MecA -
  DXE36_RS06950 spxA 1309410..1309805 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  DXE36_RS06955 trpS 1310100..1311089 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  DXE36_RS06960 - 1311209..1312831 (-) 1623 WP_000406183.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38800.32 Da        Isoelectric Point: 9.4277

>NTDB_id=1149782 DXE36_RS06940 WP_000959279.1 1307213..1308199(-) (coiA) [Staphylococcus aureus isolate 15_LA_305]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1149782 DXE36_RS06940 WP_000959279.1 1307213..1308199(-) (coiA) [Staphylococcus aureus isolate 15_LA_305]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCACCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DCY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

96.037

100

0.96

Multiple sequence alignment