Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   DXE56_RS08465 Genome accession   NZ_LT992464
Coordinates   1610503..1611489 (-) Length   328 a.a.
NCBI ID   WP_000959279.1    Uniprot ID   A0A2S6DCY7
Organism   Staphylococcus aureus isolate 3_LA_115     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1605503..1616489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE56_RS08440 - 1605763..1606110 (-) 348 WP_001242104.1 hypothetical protein -
  DXE56_RS08445 - 1606296..1606889 (+) 594 WP_000224612.1 CYTH domain-containing protein -
  DXE56_RS08450 - 1606993..1607358 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  DXE56_RS08455 yjbH 1607381..1608187 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  DXE56_RS08460 pepF 1608647..1610455 (-) 1809 WP_000082727.1 oligoendopeptidase F -
  DXE56_RS08465 coiA 1610503..1611489 (-) 987 WP_000959279.1 competence protein CoiA Machinery gene
  DXE56_RS08470 mecA 1611610..1612329 (-) 720 WP_001217731.1 adaptor protein MecA -
  DXE56_RS08475 spxA 1612700..1613095 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  DXE56_RS08480 trpS 1613390..1614379 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  DXE56_RS08485 - 1614499..1616121 (-) 1623 WP_000406183.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38800.32 Da        Isoelectric Point: 9.4277

>NTDB_id=1149562 DXE56_RS08465 WP_000959279.1 1610503..1611489(-) (coiA) [Staphylococcus aureus isolate 3_LA_115]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1149562 DXE56_RS08465 WP_000959279.1 1610503..1611489(-) (coiA) [Staphylococcus aureus isolate 3_LA_115]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DCY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

96.037

100

0.96

Multiple sequence alignment