Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | W903_RS01150 | Genome accession | NZ_CP006910 |
| Coordinates | 193090..194064 (+) | Length | 324 a.a. |
| NCBI ID | WP_001008567.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae CNCTC 10/84 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 188090..199064
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| W903_RS01110 (W903_0226) | - | 188781..189146 (+) | 366 | WP_000285373.1 | DUF1033 family protein | - |
| W903_RS01115 (W903_0227) | comYA | 189318..190289 (+) | 972 | WP_000250801.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| W903_RS01120 (W903_0228) | comYB | 190183..191226 (+) | 1044 | WP_228313184.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| W903_RS01125 (W903_0229) | comGC/cglC | 191223..191552 (+) | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| W903_RS01130 (W903_0230) | comYD | 191527..191940 (+) | 414 | WP_000244259.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| W903_RS01135 (W903_0231) | comGE | 191912..192211 (+) | 300 | WP_038406052.1 | competence type IV pilus minor pilin ComGE | - |
| W903_RS01140 (W903_0232) | comGF | 192165..192626 (+) | 462 | WP_001874060.1 | competence type IV pilus minor pilin ComGF | - |
| W903_RS01145 (W903_0233) | comGG | 192604..192975 (+) | 372 | WP_000601105.1 | competence type IV pilus minor pilin ComGG | - |
| W903_RS01150 (W903_0234) | comYH | 193090..194064 (+) | 975 | WP_001008567.1 | class I SAM-dependent methyltransferase | Machinery gene |
| W903_RS01155 (W903_0235) | - | 194096..195289 (+) | 1194 | WP_000047534.1 | acetate kinase | - |
| W903_RS01160 (W903_0236) | - | 195417..195609 (+) | 193 | Protein_173 | helix-turn-helix transcriptional regulator | - |
| W903_RS10230 (W903_0237) | - | 195588..195854 (+) | 267 | Protein_174 | hypothetical protein | - |
| W903_RS01165 (W903_0238) | - | 195923..196588 (+) | 666 | WP_000008107.1 | CPBP family intramembrane glutamic endopeptidase | - |
| W903_RS01170 (W903_0239) | proC | 196609..197379 (-) | 771 | WP_001876660.1 | pyrroline-5-carboxylate reductase | - |
| W903_RS01175 (W903_0240) | pepA | 197449..198516 (-) | 1068 | WP_001281322.1 | glutamyl aminopeptidase | - |
| W903_RS01180 (W903_0241) | - | 198696..198935 (-) | 240 | WP_000660180.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37117.05 Da Isoelectric Point: 4.4041
>NTDB_id=114930 W903_RS01150 WP_001008567.1 193090..194064(+) (comYH) [Streptococcus agalactiae CNCTC 10/84]
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELMSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELMSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
Nucleotide
Download Length: 975 bp
>NTDB_id=114930 W903_RS01150 WP_001008567.1 193090..194064(+) (comYH) [Streptococcus agalactiae CNCTC 10/84]
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAATGAG
TCAAGAGACAGTTGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCTGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAATGAG
TCAAGAGACAGTTGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCTGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.984 |
97.222 |
0.651 |
| comYH | Streptococcus mutans UA140 |
66.984 |
97.222 |
0.651 |