Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   MFPB16_RS06695 Genome accession   NZ_LT960788
Coordinates   1338302..1339579 (-) Length   425 a.a.
NCBI ID   WP_016265346.1    Uniprot ID   -
Organism   Latilactobacillus sakei strain MFPB16A1401     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1333302..1344579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MFPB16_RS06690 (MFPB16_1318) - 1336567..1338276 (-) 1710 WP_016265345.1 proline--tRNA ligase -
  MFPB16_RS06695 (MFPB16_1319) eeP 1338302..1339579 (-) 1278 WP_016265346.1 RIP metalloprotease RseP Regulator
  MFPB16_RS06700 (MFPB16_1320) - 1339785..1340573 (-) 789 WP_016265347.1 phosphatidate cytidylyltransferase -
  MFPB16_RS06705 (MFPB16_1321) - 1340604..1341359 (-) 756 WP_016265348.1 isoprenyl transferase -
  MFPB16_RS06710 (MFPB16_1322) - 1341527..1344274 (+) 2748 WP_016265349.1 YhgE/Pip domain-containing protein -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46677.43 Da        Isoelectric Point: 9.7746

>NTDB_id=1148471 MFPB16_RS06695 WP_016265346.1 1338302..1339579(-) (eeP) [Latilactobacillus sakei strain MFPB16A1401]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSVGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLILDEQGRVQQINTSDKVTTLNGVPFQIAKTDLQKELWVEGYEGGDESEMKRYPVLHDATIIEADGTEVQIAPVDV
QFQSATLINRMLTNFAGPFNNFILAILAFILFAFLSGGVPQQSNQIGTVQKNSAAQKAGLKANDRLLKVDNKKVASFTDF
SAIISEHPNETVAVRVQRGATEKIIKVTPKAVKVANQKEKVGQVGVTQKVKMDHSLKAKISYGFTQTWSIASQIFKILGS
FLTGGFSLDKLSGPVGMYSMTTQFTQQGFNALVYFLAFLSLNLGIMNLIPIPALDGGKLVLNIIEAIRRKPISPEKEGIV
TLIGVGIMVLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1148471 MFPB16_RS06695 WP_016265346.1 1338302..1339579(-) (eeP) [Latilactobacillus sakei strain MFPB16A1401]
TTGGCTGCAATTATTGCGTTTATCATCATCTTTGGTATTTTAGTAGTCGTTCATGAATTTGGGCATTTTTACATGGCTAA
GCGCTCAGGCATTTTGGTGCGTGAGTTTTCTGTCGGCATGGGACCTAAATTATTTGCAACTCGCAAAAACGGCACAACTT
ACACCATCCGATGGTTACCATTAGGTGGTTACGTTCGAATGGCGGGAATGGCCGACGATGAATCTGAAATTGAAGCTGGC
ACACAAGCGACTTTAATTTTAGACGAACAAGGACGCGTTCAACAGATTAATACAAGTGACAAGGTCACCACGTTAAACGG
GGTACCTTTCCAAATTGCTAAAACAGATTTACAAAAAGAATTGTGGGTCGAAGGTTATGAAGGCGGCGACGAGTCAGAAA
TGAAACGTTATCCCGTCTTACATGATGCGACGATTATCGAAGCGGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTC
CAATTCCAATCAGCAACGTTGATTAATCGGATGTTAACGAACTTTGCCGGACCATTTAATAACTTCATCCTCGCAATTCT
AGCCTTTATCCTCTTCGCTTTTCTAAGCGGGGGTGTGCCACAGCAATCCAATCAAATTGGCACGGTACAAAAAAATTCTG
CTGCTCAAAAGGCAGGCTTAAAAGCCAACGATCGTCTTTTGAAGGTTGATAACAAAAAAGTAGCGAGCTTCACTGACTTT
AGTGCGATAATTTCAGAACACCCTAACGAAACTGTTGCGGTGCGCGTTCAACGGGGCGCAACTGAAAAGATAATCAAGGT
GACACCCAAGGCTGTCAAAGTGGCTAACCAAAAAGAAAAGGTTGGTCAAGTAGGGGTCACACAAAAAGTCAAAATGGACC
ATAGCCTAAAAGCCAAGATTTCTTACGGCTTTACGCAAACTTGGTCAATTGCCAGTCAGATTTTCAAGATCCTCGGGTCA
TTTTTAACCGGTGGGTTCTCACTAGATAAATTATCGGGGCCGGTCGGCATGTATTCAATGACGACCCAATTTACCCAACA
AGGCTTTAATGCGTTAGTTTATTTCTTAGCATTCTTATCACTTAATTTGGGGATTATGAATCTAATTCCGATTCCGGCGT
TAGATGGTGGTAAGTTAGTCTTGAACATTATTGAAGCGATTCGTCGCAAACCAATTTCACCTGAAAAAGAAGGCATCGTG
ACATTAATCGGTGTCGGTATTATGGTGTTATTAATGGTCTTAGTCACGTGGAATGATATACAACGATTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-258)

Peptidase family M50 (Peptidase_M50)

(6-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.685

100

0.485
  eeP Streptococcus thermophilus LMG 18311

47.685

100

0.485

Multiple sequence alignment