Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LSAJ64_RS07230 Genome accession   NZ_LT960781
Coordinates   1404634..1405911 (-) Length   425 a.a.
NCBI ID   WP_101377983.1    Uniprot ID   -
Organism   Latilactobacillus sakei strain J64     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399634..1410911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LSAJ64_RS07225 (LSAJ64_1459) - 1402899..1404608 (-) 1710 WP_025016414.1 proline--tRNA ligase -
  LSAJ64_RS07230 (LSAJ64_1460) eeP 1404634..1405911 (-) 1278 WP_101377983.1 RIP metalloprotease RseP Regulator
  LSAJ64_RS07235 (LSAJ64_1461) - 1406119..1406907 (-) 789 WP_016265347.1 phosphatidate cytidylyltransferase -
  LSAJ64_RS07240 (LSAJ64_1462) - 1406938..1407693 (-) 756 WP_016265348.1 isoprenyl transferase -
  LSAJ64_RS07245 (LSAJ64_1463) - 1407861..1410608 (+) 2748 WP_101377984.1 YhgE/Pip domain-containing protein -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46622.26 Da        Isoelectric Point: 9.5179

>NTDB_id=1148398 LSAJ64_RS07230 WP_101377983.1 1404634..1405911(-) (eeP) [Latilactobacillus sakei strain J64]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSVGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLILDEQGRVQQINTSDKVTTLNGVPFQIAKTDLQKELWVEGYEGGDESEMKRYPVLHDATIIEADGTEVQIAPVDV
QFQSATLINRMLTNFAGPFNNFILAILAFILFAFLSGGVPQQSNQIGTVQENSAAQKAGLKANDRLLKVDNKKVASFTDF
SAIISEHPNETVAVRVQRGATEKTIKVTPKAVKVANQKEKVGQVGVTQKVKMDHSLKAKVSYGFTQAWSIASQIFKILGS
FLTGGFSLDKLSGPVGMYSMTTQFTQQGFNALVYFLAFLSLNLGIMNLIPIPALDGGKLVLNIIEAIRRKPISPEKEGIV
TLIGVGIMVLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1148398 LSAJ64_RS07230 WP_101377983.1 1404634..1405911(-) (eeP) [Latilactobacillus sakei strain J64]
TTGGCTGCAATTATTGCGTTTATCATCATCTTTGGTATTTTAGTAGTCGTTCATGAATTTGGGCATTTCTACATGGCAAA
ACGCTCAGGCATTTTGGTGCGAGAGTTTTCTGTCGGCATGGGACCTAAATTATTTGCCACTCGCAAAAACGGCACAACTT
ACACCATCCGGTGGTTACCATTAGGTGGTTACGTTCGAATGGCGGGAATGGCCGACGATGAATCTGAAATTGAAGCTGGC
ACACAAGCGACTTTAATTTTGGACGAACAAGGACGCGTTCAACAGATTAATACAAGTGACAAGGTCACCACGTTAAACGG
GGTGCCTTTCCAAATTGCTAAAACAGATTTACAAAAGGAATTGTGGGTCGAAGGTTATGAAGGCGGCGACGAGTCAGAAA
TGAAACGTTATCCCGTCTTACATGATGCGACGATTATCGAAGCGGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTC
CAATTCCAATCAGCAACGTTGATTAATCGGATGTTAACGAACTTTGCCGGACCATTTAATAACTTCATCCTCGCAATTCT
GGCCTTTATCCTCTTCGCTTTTCTAAGCGGGGGTGTGCCACAGCAATCCAATCAAATTGGCACGGTACAAGAGAATTCAG
CTGCTCAAAAGGCAGGCTTAAAAGCCAACGATCGTCTTTTGAAAGTTGATAACAAAAAAGTAGCGAGCTTCACTGACTTT
AGTGCGATAATTTCAGAACACCCTAACGAAACTGTTGCGGTGCGCGTTCAACGGGGCGCAACTGAAAAGACAATCAAGGT
GACACCAAAAGCTGTCAAAGTGGCTAACCAAAAAGAAAAGGTTGGTCAAGTGGGAGTCACACAAAAAGTCAAAATGGATC
ATAGCCTAAAGGCCAAGGTTTCTTACGGCTTTACACAAGCTTGGTCAATTGCCAGTCAGATTTTCAAGATCCTCGGGTCA
TTTTTAACCGGTGGGTTCTCACTAGATAAATTATCGGGGCCGGTCGGCATGTATTCAATGACGACCCAATTTACCCAACA
AGGCTTTAATGCGTTAGTTTATTTCTTAGCGTTCTTATCACTTAATTTGGGGATTATGAATCTAATTCCGATTCCGGCGT
TAGATGGTGGTAAGTTAGTCTTGAACATTATTGAAGCGATTCGTCGCAAACCAATTTCACCTGAAAAAGAAGGCATCGTG
ACATTAATCGGTGTCGGTATTATGGTGTTATTAATGGTCTTAGTCACGTGGAACGATATACAACGATTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-258)

Peptidase family M50 (Peptidase_M50)

(6-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.917

100

0.487
  eeP Streptococcus thermophilus LMG 18311

47.917

100

0.487

Multiple sequence alignment