Detailed information
Overview
| Name | opaR | Type | Regulator |
| Locus tag | VTAP4600_RS01310 | Genome accession | NZ_LT960611 |
| Coordinates | 277558..278169 (-) | Length | 203 a.a. |
| NCBI ID | WP_102521148.1 | Uniprot ID | A0A2N8Z8M4 |
| Organism | Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 272558..283169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VTAP4600_RS01295 (VTAP4600_A0258) | aceF | 272875..274782 (+) | 1908 | WP_102521145.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| VTAP4600_RS01300 (VTAP4600_A0259) | lpdA | 275034..276461 (+) | 1428 | WP_102521146.1 | dihydrolipoyl dehydrogenase | - |
| VTAP4600_RS01305 (VTAP4600_A0260) | - | 276573..277415 (-) | 843 | WP_102521147.1 | HDOD domain-containing protein | - |
| VTAP4600_RS01310 (VTAP4600_A0261) | opaR | 277558..278169 (-) | 612 | WP_102521148.1 | TetR/AcrR family transcriptional regulator | Regulator |
| VTAP4600_RS01315 (VTAP4600_A0262) | hpt | 278429..278959 (+) | 531 | WP_102521149.1 | hypoxanthine phosphoribosyltransferase | - |
| VTAP4600_RS01320 (VTAP4600_A0263) | can | 279034..279696 (-) | 663 | WP_102521150.1 | carbonate dehydratase | - |
| VTAP4600_RS01325 (VTAP4600_A0264) | - | 279978..281630 (+) | 1653 | WP_102521151.1 | SulP family inorganic anion transporter | - |
| VTAP4600_RS01330 (VTAP4600_A0265) | - | 281756..282673 (+) | 918 | WP_102523849.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 203 a.a. Molecular weight: 23456.50 Da Isoelectric Point: 5.3332
>NTDB_id=1148303 VTAP4600_RS01310 WP_102521148.1 277558..278169(-) (opaR) [Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600]
MDMVTKRPRTRLSPQKRKEQLHDIAIEVFARRGIGRGGHADIAEIAQVSVATVFNYFQTREDLVDEVLNQVEKHYSEFIN
KSIDTDASAEYNLNTLTNNIINSAIIGENWMKVWFEWSTSTRDEVWPLFLTCNESNQKKMELMFDNAMESGEICDRHNSA
DLANLFHGICYSLYVQANRNPDAQYLATVKESFLSMLCIYKQK
MDMVTKRPRTRLSPQKRKEQLHDIAIEVFARRGIGRGGHADIAEIAQVSVATVFNYFQTREDLVDEVLNQVEKHYSEFIN
KSIDTDASAEYNLNTLTNNIINSAIIGENWMKVWFEWSTSTRDEVWPLFLTCNESNQKKMELMFDNAMESGEICDRHNSA
DLANLFHGICYSLYVQANRNPDAQYLATVKESFLSMLCIYKQK
Nucleotide
Download Length: 612 bp
>NTDB_id=1148303 VTAP4600_RS01310 WP_102521148.1 277558..278169(-) (opaR) [Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600]
ATGGATATGGTAACAAAAAGACCAAGGACACGGCTTTCTCCTCAAAAACGAAAAGAACAACTTCATGATATTGCAATTGA
AGTGTTTGCACGCAGAGGGATTGGTCGAGGTGGGCACGCAGACATCGCTGAAATAGCACAAGTCTCCGTCGCTACCGTTT
TTAATTACTTTCAGACTCGCGAAGATTTAGTCGATGAAGTACTGAACCAAGTAGAGAAGCATTATTCTGAGTTCATTAAT
AAAAGCATCGATACAGATGCGAGCGCAGAATACAACCTCAATACACTCACCAACAACATCATTAACTCGGCTATTATTGG
TGAAAATTGGATGAAAGTATGGTTTGAATGGAGCACTTCTACACGAGACGAAGTCTGGCCATTATTTTTGACTTGCAACG
AAAGCAATCAAAAGAAAATGGAGCTAATGTTCGACAATGCGATGGAGAGTGGCGAGATTTGTGACCGCCATAACAGCGCC
GATCTAGCAAACTTATTCCACGGCATCTGTTATTCACTTTATGTGCAAGCCAATCGGAACCCTGATGCTCAATACTTAGC
AACCGTAAAGGAAAGCTTCCTTTCTATGCTTTGTATTTACAAGCAAAAATAG
ATGGATATGGTAACAAAAAGACCAAGGACACGGCTTTCTCCTCAAAAACGAAAAGAACAACTTCATGATATTGCAATTGA
AGTGTTTGCACGCAGAGGGATTGGTCGAGGTGGGCACGCAGACATCGCTGAAATAGCACAAGTCTCCGTCGCTACCGTTT
TTAATTACTTTCAGACTCGCGAAGATTTAGTCGATGAAGTACTGAACCAAGTAGAGAAGCATTATTCTGAGTTCATTAAT
AAAAGCATCGATACAGATGCGAGCGCAGAATACAACCTCAATACACTCACCAACAACATCATTAACTCGGCTATTATTGG
TGAAAATTGGATGAAAGTATGGTTTGAATGGAGCACTTCTACACGAGACGAAGTCTGGCCATTATTTTTGACTTGCAACG
AAAGCAATCAAAAGAAAATGGAGCTAATGTTCGACAATGCGATGGAGAGTGGCGAGATTTGTGACCGCCATAACAGCGCC
GATCTAGCAAACTTATTCCACGGCATCTGTTATTCACTTTATGTGCAAGCCAATCGGAACCCTGATGCTCAATACTTAGC
AACCGTAAAGGAAAGCTTCCTTTCTATGCTTTGTATTTACAAGCAAAAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
62.069 |
100 |
0.621 |
| hapR | Vibrio cholerae C6706 |
59.596 |
97.537 |
0.581 |
| hapR | Vibrio cholerae strain A1552 |
59.596 |
97.537 |
0.581 |