Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CKV85_RS11605 Genome accession   NZ_LT906454
Coordinates   2329799..2330566 (+) Length   255 a.a.
NCBI ID   WP_095123681.1    Uniprot ID   -
Organism   Streptococcus acidominimus strain NCTC11291     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2324799..2335566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CKV85_RS11580 - 2325503..2326951 (-) 1449 Protein_2268 IS1182 family transposase -
  CKV85_RS11595 (SAMEA4504048_02484) rlmH 2327448..2327927 (-) 480 WP_017769779.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CKV85_RS11600 (SAMEA4504048_02485) htrA 2328132..2329361 (+) 1230 WP_095123680.1 S1C family serine protease Regulator
  CKV85_RS11605 (SAMEA4504048_02486) spo0J 2329799..2330566 (+) 768 WP_095123681.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29184.54 Da        Isoelectric Point: 9.1814

>NTDB_id=1147520 CKV85_RS11605 WP_095123681.1 2329799..2330566(+) (spo0J) [Streptococcus acidominimus strain NCTC11291]
MKDILKEIAISDITTNPNQPRQIFKEDHIQSLAQSIANNGLIQPIVVRPSDIIGYELIAGERRLRAHQYLGKTTIKALIT
EASYQESMKQALVENLQRADLNPIEEAKAYQNILDKLSLTHQELADLVSKSRPYISNQIRLLQLSPSLQDAIIADQISPG
HARLILALPKEQQDHWFQKIIQHQWSVHQLEKELKKQSQRPKAQLGDPFKADIEKELQKTLGLPIHISGFQQKKGQITIS
FQNEEEFNRVINMLK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1147520 CKV85_RS11605 WP_095123681.1 2329799..2330566(+) (spo0J) [Streptococcus acidominimus strain NCTC11291]
ATGAAAGATATTTTAAAAGAAATTGCCATTAGTGATATTACAACTAATCCTAATCAACCACGACAAATTTTTAAGGAAGA
CCATATCCAATCGCTAGCACAATCAATCGCTAATAATGGTTTAATTCAGCCAATTGTTGTCAGACCATCAGATATTATTG
GTTACGAACTAATTGCTGGAGAGCGTCGCCTACGCGCCCATCAATACCTGGGAAAAACAACGATTAAAGCTCTTATCACA
GAAGCCTCATATCAAGAAAGTATGAAGCAAGCCTTAGTTGAAAATTTACAAAGAGCAGATCTTAACCCCATTGAAGAAGC
CAAAGCTTACCAGAATATCTTGGATAAACTTTCTCTAACCCACCAGGAATTGGCAGACTTAGTTAGCAAATCTAGACCTT
ACATCTCCAATCAGATTAGACTCTTACAGTTATCTCCCTCATTACAAGATGCCATTATCGCTGATCAGATCTCTCCAGGA
CATGCCAGATTAATATTGGCGCTTCCTAAGGAGCAACAGGATCATTGGTTCCAAAAAATTATTCAACATCAGTGGAGCGT
TCATCAACTTGAAAAGGAGCTCAAAAAACAATCTCAAAGACCTAAAGCGCAACTAGGCGATCCTTTTAAGGCTGACATTG
AAAAGGAGCTGCAAAAAACGCTCGGCCTGCCTATTCACATTTCTGGTTTTCAACAAAAAAAAGGGCAGATCACCATCTCG
TTTCAAAATGAAGAAGAGTTTAACAGAGTTATCAACATGCTAAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

51.765

100

0.518

Multiple sequence alignment