Detailed information NTG1147362

Bioinformatically predicted

Overview

• Name: rec2
• Type: Machinery gene
• Locus tag: CKV78_RS05110
• Genome accession: NZ_LT906448
• Coordinates: 1123222..1125642 (-)
• Length: 806 a.a.
• NCBI ID: WP_005762585.1
• Uniprot ID: C9PRM9
• Organism: Pasteurella dagmatis strain NCTC11617
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1118222..1130642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV78_RS05090 (SAMEA4362423_01052)	kdsB	1119429..1120214 (-)	786	WP_005762578.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CKV78_RS05095 (SAMEA4362423_01053)	-	1120258..1120446 (-)	189	WP_032855199.1	Trm112 family protein	-
CKV78_RS05100 (SAMEA4362423_01054)	lpxK	1120462..1121439 (-)	978	WP_032855201.1	tetraacyldisaccharide 4'-kinase	-
CKV78_RS05105 (SAMEA4362423_01055)	msbA	1121464..1123212 (-)	1749	WP_005762584.1	lipid A ABC transporter ATP-binding protein/permease MsbA	-
CKV78_RS05110 (SAMEA4362423_01056)	rec2	1123222..1125642 (-)	2421	WP_005762585.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CKV78_RS05115 (SAMEA4362423_01057)	dksA	1125961..1126398 (+)	438	WP_005762587.1	RNA polymerase-binding protein DksA	-
CKV78_RS05120 (SAMEA4362423_01058)	pcnB	1126483..1127982 (+)	1500	WP_005762589.1	polynucleotide adenylyltransferase PcnB	-
CKV78_RS05125 (SAMEA4362423_01059)	folK	1127992..1128471 (+)	480	WP_005762591.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
CKV78_RS05130 (SAMEA4362423_01060)	-	1128542..1129624 (-)	1083	WP_032855205.1	homoserine O-acetyltransferase	-
CKV78_RS05135 (SAMEA4362423_01061)	-	1129803..1130492 (+)	690	WP_005762594.1	vancomycin high temperature exclusion protein	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 92363.66 Da
• Isoelectric Point: 9.5989

>NTDB_id=1147362 CKV78_RS05110 WP_005762585.1 1123222..1125642(-) (rec2) [Pasteurella dagmatis strain NCTC11617]
MILYLFIFSALSLIWVPSDFLLDWFWGIRCLLVCSGLVGVAYYYRVDDKIKCLLLYLMFLLLSSIYVHSYPIQLLKLADN
VAHLPKQVETKIKIIEILHQQDYQSAIATATLSSDLPEQRIFIQWKLSEKIKLGQVWKANLRLRPISSRLNQGGFDKQQW
YFSKGITAWASVKSAVKIQQDFSLRAMLLERAFIQTESLSAQGLLLALAFGERAWLSSLHKQIYQRTNTAHLIAISGLHI
GLAMGIGFLLGRGMQYFLSTRLISPYFPLFIGLLIAGGYALLAGLAIPTQRAFIALSFVFLLRLSRLHYSAWQLFFRIVA
ILLFYDPLMCLSSSFWLSLGAVISLIIWYQLFPLSLLHWRGKPLEQSVWRKVRWLLSLFHLQIGLFFLFAPVQLLMFGGI
SWGGLFANLIAVPLYSFILVPIILFTLVTQNYFITWRWANVLVEQITQWLSYLTEQWLQISTWQTYLIIVFLTSIFILFL
RYTYLKIVVEQEGAVLTRPKGFHLALNDKCDYQTIKVTFSICGMLICSLFGYISYQIYQEPDWRLETIDVGQGLAMLVVK
NGRGILYDTGASWNGGSMAELELLPYLLREGLKIDKLILSHDDNDHSGGVKTILTQFPDIEFVTPSFRNYGKKDRTFCIR
GQQWQWQGLDFKVLSPFQIVQRAKNEHSCVLLISDGQYSVLLMGDADVDVEKQLLFDLPLIDVLQVGHHGSKTSTSEALL
TQINPKIALISSGRWNAWGFPHQVVNDRLNIIGADVYNTAHTGQISIKFYKNKLKIALARTKFIPWYRRLIGLQTKSEYN
AATINY

Nucleotide

• Length: 2421 bp

>NTDB_id=1147362 CKV78_RS05110 WP_005762585.1 1123222..1125642(-) (rec2) [Pasteurella dagmatis strain NCTC11617]
ATGATTTTATATCTGTTTATTTTCAGTGCATTATCACTAATTTGGGTGCCAAGCGATTTTTTATTGGATTGGTTTTGGGG
GATAAGATGCTTATTGGTCTGTAGTGGATTAGTTGGAGTTGCGTATTACTATAGAGTTGATGACAAAATAAAGTGCTTAT
TGTTGTATTTAATGTTCTTGTTACTAAGTAGTATTTATGTGCATTCTTACCCAATCCAATTGCTGAAATTAGCGGATAAT
GTTGCCCATTTACCAAAACAAGTCGAAACAAAGATTAAAATTATTGAAATTTTGCATCAGCAAGACTATCAAAGTGCGAT
TGCAACAGCAACATTAAGCTCAGATTTACCTGAACAACGTATTTTTATTCAATGGAAATTATCTGAAAAAATAAAACTAG
GGCAGGTTTGGAAAGCTAACTTACGTCTTCGACCTATTTCATCACGTTTAAATCAAGGAGGATTTGATAAACAGCAATGG
TATTTTTCCAAAGGTATTACCGCTTGGGCATCAGTAAAAAGTGCGGTTAAAATTCAACAAGATTTTTCGTTGCGAGCAAT
GTTGCTTGAGCGAGCCTTCATTCAGACTGAATCATTATCTGCACAAGGATTGTTGCTTGCATTAGCTTTCGGAGAACGAG
CTTGGTTATCGTCCTTACATAAGCAAATTTACCAACGAACTAATACAGCTCATTTAATCGCTATTTCAGGATTACATATT
GGCTTAGCAATGGGGATCGGTTTTTTACTTGGGCGGGGAATGCAATATTTTTTATCAACGCGTCTTATTTCTCCTTATTT
CCCCTTATTCATAGGGCTACTTATTGCAGGTGGATATGCGCTTTTAGCTGGTTTAGCGATACCAACTCAACGTGCTTTTA
TTGCATTGTCTTTCGTGTTTCTATTGCGTTTATCTCGCTTACATTACAGCGCTTGGCAGTTGTTCTTTCGAATTGTTGCT
ATTTTATTGTTTTATGATCCTTTAATGTGTTTATCATCCAGTTTTTGGCTATCTTTAGGGGCGGTTATTTCATTAATCAT
CTGGTATCAACTTTTCCCACTATCGTTATTACATTGGCGTGGAAAGCCTTTAGAACAAAGTGTATGGCGTAAAGTACGGT
GGCTACTTTCATTATTTCATTTGCAAATAGGTTTATTTTTTTTATTTGCGCCGGTGCAATTGCTGATGTTTGGTGGTATA
TCTTGGGGAGGTTTATTTGCTAACTTAATTGCAGTACCCCTGTATTCCTTTATTCTCGTACCGATTATTTTATTTACATT
AGTGACTCAAAATTATTTCATAACTTGGAGATGGGCAAATGTATTGGTGGAGCAAATCACACAATGGTTATCTTATTTAA
CTGAACAATGGCTACAAATCTCAACATGGCAGACTTATCTTATTATAGTTTTTCTTACTAGTATTTTTATTTTATTTTTA
CGTTATACCTATTTAAAGATAGTTGTGGAGCAAGAAGGTGCAGTGTTAACCCGACCTAAAGGATTCCATCTTGCACTTAA
TGACAAGTGTGATTATCAAACTATCAAAGTTACTTTTTCGATTTGCGGGATGTTGATTTGTAGTTTATTTGGTTATATCA
GTTATCAAATTTATCAAGAACCAGATTGGCGCTTAGAAACCATTGATGTAGGGCAAGGACTTGCGATGTTGGTTGTGAAA
AATGGAAGAGGGATATTGTACGATACTGGTGCTTCTTGGAATGGTGGTAGTATGGCGGAATTAGAGCTTTTACCTTATTT
ACTACGAGAAGGGTTGAAAATCGATAAACTGATTTTGAGCCATGATGACAATGATCATTCGGGTGGGGTAAAAACAATAT
TAACACAGTTTCCTGATATTGAGTTTGTGACACCTTCTTTTAGAAATTATGGAAAAAAGGATCGCACTTTTTGCATTCGA
GGGCAACAATGGCAGTGGCAAGGATTGGATTTTAAAGTATTATCACCGTTCCAAATTGTACAGAGAGCTAAAAATGAGCA
TTCTTGCGTGTTACTGATTTCTGATGGACAATATTCAGTATTGTTAATGGGAGATGCTGATGTGGATGTAGAAAAACAGT
TATTATTTGATTTACCTTTAATCGATGTTTTACAGGTTGGACATCACGGCAGTAAAACTTCGACAAGTGAAGCGTTATTG
ACTCAAATCAACCCTAAAATTGCATTAATTTCAAGTGGACGTTGGAATGCTTGGGGCTTTCCTCATCAAGTGGTTAATGA
TCGTTTAAATATTATTGGTGCAGATGTTTATAATACTGCACACACTGGACAAATTAGCATCAAATTTTACAAAAATAAGC
TAAAAATAGCATTGGCTCGTACAAAATTTATCCCCTGGTATCGTAGATTAATTGGATTACAAACAAAATCAGAGTACAAT
GCCGCGACTATTAATTATTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-481)

• Metallo-beta-lactamase superfamily (Lactamase_B) (549-733)

• Domain of unknown function (DUF4131) (DUF4131) (25-175)

3D structure

• AlphaFold DB: C9PRM9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rec2	Haemophilus influenzae Rd KW20	52.394	93.3	0.489