Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | CKV83_RS02905 | Genome accession | NZ_LT906439 |
| Coordinates | 622053..623285 (+) | Length | 410 a.a. |
| NCBI ID | WP_018374568.1 | Uniprot ID | A0A239SPT2 |
| Organism | Streptococcus merionis strain NCTC13788 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 617053..628285
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV83_RS02875 (SAMEA4412692_00576) | rplU | 619139..619453 (+) | 315 | WP_018374562.1 | 50S ribosomal protein L21 | - |
| CKV83_RS02880 (SAMEA4412692_00577) | - | 619469..619834 (+) | 366 | WP_018374563.1 | ribosomal-processing cysteine protease Prp | - |
| CKV83_RS02885 (SAMEA4412692_00578) | rpmA | 619827..620120 (+) | 294 | WP_018374564.1 | 50S ribosomal protein L27 | - |
| CKV83_RS02890 (SAMEA4412692_00579) | - | 620401..621240 (+) | 840 | WP_018374565.1 | thymidylate synthase | - |
| CKV83_RS02895 (SAMEA4412692_00580) | - | 621333..621842 (+) | 510 | WP_018374566.1 | dihydrofolate reductase | - |
| CKV83_RS02900 (SAMEA4412692_00581) | - | 621845..622015 (+) | 171 | WP_095114562.1 | hypothetical protein | - |
| CKV83_RS02905 (SAMEA4412692_00582) | clpX | 622053..623285 (+) | 1233 | WP_018374568.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| CKV83_RS02910 (SAMEA4412692_00583) | yihA | 623587..624183 (+) | 597 | WP_018374569.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| CKV83_RS02915 (SAMEA4412692_00584) | - | 624429..624752 (+) | 324 | WP_018374570.1 | hypothetical protein | - |
| CKV83_RS02920 (SAMEA4412692_00585) | - | 624742..626751 (+) | 2010 | WP_018374571.1 | V-type ATP synthase subunit I | - |
| CKV83_RS02925 (SAMEA4412692_00586) | - | 626752..627231 (+) | 480 | WP_018374572.1 | V-type ATP synthase subunit K | - |
| CKV83_RS02930 (SAMEA4412692_00587) | - | 627266..627847 (+) | 582 | WP_018374573.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45394.00 Da Isoelectric Point: 4.4818
>NTDB_id=1147127 CKV83_RS02905 WP_018374568.1 622053..623285(+) (clpX) [Streptococcus merionis strain NCTC13788]
MPTNKKNEMMVYCSFCGKNQDEVQKIIAGNNVFICNECVELAQEIIREEMAEEVLADLSEVPKPQELLTILDNYVIGQDK
AKRTLAVAVYNHYKRINFQHSKDESQEVDLQKSNILMIGPTGSGKTLLAQTLARSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQASDFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQVNT
QNILFIVGGAFDGIEEIVKQRLGEKVIGFGHNNKGIDEGASYMQAIEADDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPKNALVKQYQTLLSYDDVELVFEDDALQAIAEKALSRKTGARGLRSIIEETMMDVMFEIPSQEDVKVVYITKAAVE
GRDKPILETA
MPTNKKNEMMVYCSFCGKNQDEVQKIIAGNNVFICNECVELAQEIIREEMAEEVLADLSEVPKPQELLTILDNYVIGQDK
AKRTLAVAVYNHYKRINFQHSKDESQEVDLQKSNILMIGPTGSGKTLLAQTLARSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQASDFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQVNT
QNILFIVGGAFDGIEEIVKQRLGEKVIGFGHNNKGIDEGASYMQAIEADDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPKNALVKQYQTLLSYDDVELVFEDDALQAIAEKALSRKTGARGLRSIIEETMMDVMFEIPSQEDVKVVYITKAAVE
GRDKPILETA
Nucleotide
Download Length: 1233 bp
>NTDB_id=1147127 CKV83_RS02905 WP_018374568.1 622053..623285(+) (clpX) [Streptococcus merionis strain NCTC13788]
ATGCCAACCAATAAGAAAAATGAAATGATGGTTTATTGCTCTTTTTGTGGCAAAAACCAAGACGAAGTCCAGAAGATTAT
CGCGGGGAACAATGTCTTTATCTGTAACGAATGTGTCGAATTAGCTCAAGAAATTATTCGTGAAGAGATGGCTGAGGAAG
TCCTTGCAGACCTGTCTGAAGTCCCAAAACCGCAAGAATTGTTGACGATTCTGGACAACTACGTTATTGGACAGGACAAG
GCCAAACGTACTTTGGCAGTTGCTGTTTACAATCACTATAAGCGCATTAATTTCCAGCACAGCAAGGATGAGAGTCAAGA
AGTGGACTTACAAAAGTCTAATATTCTCATGATTGGGCCTACAGGTTCGGGGAAGACCTTATTAGCACAGACCTTGGCGC
GTAGTCTCAATGTACCTTTTGCCATTGCGGACGCGACAGCACTGACAGAGGCGGGATATGTCGGTGAAGATGTGGAGAAT
ATCCTCCTCAAACTTTTGCAGGCCTCGGATTTCAATATCGAGCGCGCCGAGCGAGGGATTATCTATGTTGATGAAATCGA
CAAGATTGCTAAAAAAGGGGAGAACGTCTCTATTACTCGTGATGTTTCAGGCGAAGGAGTGCAACAAGCGCTGTTAAAAA
TCATCGAAGGTACTGTGGCTAGCGTGCCGCCTCAAGGTGGTCGTAAACACCCGAATCAGGAGATGATTCAGGTCAATACA
CAGAATATCCTCTTTATTGTGGGTGGCGCTTTTGATGGTATTGAAGAGATTGTCAAGCAACGCTTAGGCGAGAAAGTTAT
CGGTTTTGGTCACAACAACAAGGGCATTGACGAAGGAGCCTCTTACATGCAGGCTATTGAAGCAGATGATATTCAGAAAT
TTGGGATTATTCCTGAATTAATCGGTCGTTTGCCAGTCTTTGCAGCCCTTGAGCAGCTGACAGTAGATGATTTGGTTCGC
ATTTTGAAAGAGCCGAAAAATGCTTTGGTTAAGCAATATCAGACTTTGCTTTCTTACGACGATGTGGAACTTGTTTTTGA
AGATGATGCTTTACAAGCCATTGCTGAGAAAGCTTTGTCTCGTAAAACAGGTGCGCGTGGGCTTCGTTCTATTATCGAAG
AAACCATGATGGATGTTATGTTTGAGATACCGAGTCAAGAAGATGTCAAAGTGGTCTATATTACCAAAGCAGCTGTTGAA
GGCCGTGATAAACCCATTTTAGAAACTGCCTAA
ATGCCAACCAATAAGAAAAATGAAATGATGGTTTATTGCTCTTTTTGTGGCAAAAACCAAGACGAAGTCCAGAAGATTAT
CGCGGGGAACAATGTCTTTATCTGTAACGAATGTGTCGAATTAGCTCAAGAAATTATTCGTGAAGAGATGGCTGAGGAAG
TCCTTGCAGACCTGTCTGAAGTCCCAAAACCGCAAGAATTGTTGACGATTCTGGACAACTACGTTATTGGACAGGACAAG
GCCAAACGTACTTTGGCAGTTGCTGTTTACAATCACTATAAGCGCATTAATTTCCAGCACAGCAAGGATGAGAGTCAAGA
AGTGGACTTACAAAAGTCTAATATTCTCATGATTGGGCCTACAGGTTCGGGGAAGACCTTATTAGCACAGACCTTGGCGC
GTAGTCTCAATGTACCTTTTGCCATTGCGGACGCGACAGCACTGACAGAGGCGGGATATGTCGGTGAAGATGTGGAGAAT
ATCCTCCTCAAACTTTTGCAGGCCTCGGATTTCAATATCGAGCGCGCCGAGCGAGGGATTATCTATGTTGATGAAATCGA
CAAGATTGCTAAAAAAGGGGAGAACGTCTCTATTACTCGTGATGTTTCAGGCGAAGGAGTGCAACAAGCGCTGTTAAAAA
TCATCGAAGGTACTGTGGCTAGCGTGCCGCCTCAAGGTGGTCGTAAACACCCGAATCAGGAGATGATTCAGGTCAATACA
CAGAATATCCTCTTTATTGTGGGTGGCGCTTTTGATGGTATTGAAGAGATTGTCAAGCAACGCTTAGGCGAGAAAGTTAT
CGGTTTTGGTCACAACAACAAGGGCATTGACGAAGGAGCCTCTTACATGCAGGCTATTGAAGCAGATGATATTCAGAAAT
TTGGGATTATTCCTGAATTAATCGGTCGTTTGCCAGTCTTTGCAGCCCTTGAGCAGCTGACAGTAGATGATTTGGTTCGC
ATTTTGAAAGAGCCGAAAAATGCTTTGGTTAAGCAATATCAGACTTTGCTTTCTTACGACGATGTGGAACTTGTTTTTGA
AGATGATGCTTTACAAGCCATTGCTGAGAAAGCTTTGTCTCGTAAAACAGGTGCGCGTGGGCTTCGTTCTATTATCGAAG
AAACCATGATGGATGTTATGTTTGAGATACCGAGTCAAGAAGATGTCAAAGTGGTCTATATTACCAAAGCAGCTGTTGAA
GGCCGTGATAAACCCATTTTAGAAACTGCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
84.146 |
100 |
0.841 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.209 |
98.049 |
0.571 |