Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | CKV86_RS03105 | Genome accession | NZ_LT906437 |
| Coordinates | 520921..521853 (+) | Length | 310 a.a. |
| NCBI ID | WP_048654306.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain NCTC13799 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 515921..526853
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV86_RS03070 (SAMEA4076765_00518) | - | 516422..516931 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| CKV86_RS03080 (SAMEA4076765_00519) | - | 517163..517744 (-) | 582 | WP_047923823.1 | superoxide dismutase | - |
| CKV86_RS03090 (SAMEA4076765_00520) | dnaB | 517908..519314 (+) | 1407 | WP_047923824.1 | replicative DNA helicase | - |
| CKV86_RS03095 (SAMEA4076765_00521) | pilH | 519622..520284 (+) | 663 | WP_047923835.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CKV86_RS03100 (SAMEA4076765_00522) | pilI | 520316..520924 (+) | 609 | WP_047923834.1 | type IV pilus modification protein PilV | Machinery gene |
| CKV86_RS03105 (SAMEA4076765_00523) | pilJ | 520921..521853 (+) | 933 | WP_048654306.1 | PilW family protein | Machinery gene |
| CKV86_RS03110 (SAMEA4076765_00524) | pilK | 521832..522443 (+) | 612 | WP_047923832.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CKV86_RS03115 (SAMEA4076765_00525) | pilL | 522445..522918 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| CKV86_RS03120 (SAMEA4076765_00526) | - | 522988..523296 (-) | 309 | WP_025456241.1 | AzlD family protein | - |
| CKV86_RS03125 | - | 523293..524004 (-) | 712 | Protein_526 | AzlC family ABC transporter permease | - |
| CKV86_RS03130 (SAMEA4076765_00529) | dut | 524170..524622 (+) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| CKV86_RS03135 (SAMEA4076765_00530) | dapC | 524694..525881 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| CKV86_RS03140 (SAMEA4076765_00531) | yaaA | 526037..526816 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 310 a.a. Molecular weight: 34140.85 Da Isoelectric Point: 8.7147
>NTDB_id=1147021 CKV86_RS03105 WP_048654306.1 520921..521853(+) (pilJ) [Neisseria gonorrhoeae strain NCTC13799]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIGNDVVFNVAQKNALFSLKRNSTNKLIPITESPNINYQNFFQVSSALIFQYGIDDVDASADTTVVSSCAVISK
PGKQIPTLEDAKKELKIQNSDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQLNEKGEWGNPQLLAKKIKRMRVRYIYV
SGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIGNDVVFNVAQKNALFSLKRNSTNKLIPITESPNINYQNFFQVSSALIFQYGIDDVDASADTTVVSSCAVISK
PGKQIPTLEDAKKELKIQNSDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQLNEKGEWGNPQLLAKKIKRMRVRYIYV
SGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 933 bp
>NTDB_id=1147021 CKV86_RS03105 WP_048654306.1 520921..521853(+) (pilJ) [Neisseria gonorrhoeae strain NCTC13799]
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGGAAATGATGTTGTTTTCAATGTGGCGCAAAAAAACGCTCTTTTTTCCTTAAAAAG
GAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATCAGAATTTTTTCCAGGTTAGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTGATGCAAGCGCCGATACTACCGTCGTCAGCAGCTGTGCCGTAATATCGAAA
CCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCAGAATTCTGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGAAGGTTTGTTCCGCTTCCAAT
TGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTATATCTATGTT
TCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTCTGTTACGCC
TGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTTACC
GTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGGAAATGATGTTGTTTTCAATGTGGCGCAAAAAAACGCTCTTTTTTCCTTAAAAAG
GAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATCAGAATTTTTTCCAGGTTAGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTGATGCAAGCGCCGATACTACCGTCGTCAGCAGCTGTGCCGTAATATCGAAA
CCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCAGAATTCTGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGAAGGTTTGTTCCGCTTCCAAT
TGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTATATCTATGTT
TCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTCTGTTACGCC
TGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTTACC
GTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
97.125 |
100 |
0.981 |