Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | CKV66_RS04660 | Genome accession | NZ_LT906434 |
| Coordinates | 1016689..1017243 (+) | Length | 184 a.a. |
| NCBI ID | WP_085364404.1 | Uniprot ID | A0A1X3CN64 |
| Organism | Neisseria zoodegmatis strain NCTC12230 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1011689..1022243
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV66_RS04640 (SAMEA4504057_00915) | dnaB | 1012543..1013955 (+) | 1413 | WP_085364408.1 | replicative DNA helicase | - |
| CKV66_RS04645 (SAMEA4504057_00916) | - | 1014201..1014959 (+) | 759 | WP_231990522.1 | Tfp pilus assembly protein FimT/FimU | - |
| CKV66_RS04650 (SAMEA4504057_00917) | pilV | 1015037..1015780 (+) | 744 | WP_085364406.1 | type IV pilus modification protein PilV | - |
| CKV66_RS04655 (SAMEA4504057_00918) | - | 1015784..1016710 (+) | 927 | WP_085364405.1 | PilW family protein | - |
| CKV66_RS04660 (SAMEA4504057_00919) | pilK | 1016689..1017243 (+) | 555 | WP_085364404.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CKV66_RS04665 (SAMEA4504057_00920) | - | 1017256..1017711 (+) | 456 | WP_269457272.1 | PilX family type IV pilin | - |
| CKV66_RS04675 (SAMEA4504057_00921) | - | 1017928..1018767 (+) | 840 | WP_085364402.1 | mechanosensitive ion channel family protein | - |
| CKV66_RS04680 (SAMEA4504057_00922) | - | 1018773..1019282 (+) | 510 | WP_085364401.1 | protein disulfide oxidoreductase | - |
| CKV66_RS04685 (SAMEA4504057_00923) | clpX | 1019482..1020759 (-) | 1278 | WP_085364400.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| CKV66_RS04690 (SAMEA4504057_00925) | - | 1021232..1022170 (+) | 939 | WP_370686958.1 | serine hydrolase | - |
Sequence
Protein
Download Length: 184 a.a. Molecular weight: 19863.38 Da Isoelectric Point: 9.2486
>NTDB_id=1146936 CKV66_RS04660 WP_085364404.1 1016689..1017243(+) (pilK) [Neisseria zoodegmatis strain NCTC12230]
MRKPYAVNYSKKSAQQGFSLFIVLMVMIVVAFFVVSVTQSYNTEQRISTNDADRKFAAALAEAALRAGEKQIAEFDGEIT
FTDDCKDAKCRAAGSVEGSFGGIVVTGNSSVEAWRRSDGGSKSKLYIDTNGAKLPNSGASQQPRYIIEYISTQNDGSVIY
RVTAKAWGKNANTVVVLQSYVSAG
MRKPYAVNYSKKSAQQGFSLFIVLMVMIVVAFFVVSVTQSYNTEQRISTNDADRKFAAALAEAALRAGEKQIAEFDGEIT
FTDDCKDAKCRAAGSVEGSFGGIVVTGNSSVEAWRRSDGGSKSKLYIDTNGAKLPNSGASQQPRYIIEYISTQNDGSVIY
RVTAKAWGKNANTVVVLQSYVSAG
Nucleotide
Download Length: 555 bp
>NTDB_id=1146936 CKV66_RS04660 WP_085364404.1 1016689..1017243(+) (pilK) [Neisseria zoodegmatis strain NCTC12230]
ATGCGCAAACCGTACGCTGTAAATTATTCAAAGAAATCGGCACAGCAAGGTTTTTCATTGTTTATTGTATTGATGGTAAT
GATTGTAGTCGCATTTTTCGTTGTTAGTGTGACCCAATCATACAATACCGAACAGCGTATTAGTACCAATGATGCAGACC
GAAAATTTGCAGCGGCCTTGGCAGAAGCTGCTTTGAGGGCGGGGGAAAAGCAAATTGCAGAATTTGATGGAGAGATCACA
TTTACTGATGACTGCAAAGATGCTAAATGCAGGGCGGCTGGTAGCGTTGAAGGTAGCTTTGGAGGGATTGTTGTTACGGG
TAATTCTTCAGTAGAGGCGTGGCGGCGAAGCGATGGTGGAAGTAAATCTAAACTTTACATAGATACCAATGGAGCAAAGT
TACCCAATTCAGGAGCCAGTCAACAGCCGCGCTACATTATAGAATATATCAGCACTCAAAATGACGGTTCGGTCATTTAC
CGCGTTACGGCTAAAGCGTGGGGTAAAAATGCGAATACCGTTGTGGTTTTGCAATCGTATGTATCTGCCGGTTAA
ATGCGCAAACCGTACGCTGTAAATTATTCAAAGAAATCGGCACAGCAAGGTTTTTCATTGTTTATTGTATTGATGGTAAT
GATTGTAGTCGCATTTTTCGTTGTTAGTGTGACCCAATCATACAATACCGAACAGCGTATTAGTACCAATGATGCAGACC
GAAAATTTGCAGCGGCCTTGGCAGAAGCTGCTTTGAGGGCGGGGGAAAAGCAAATTGCAGAATTTGATGGAGAGATCACA
TTTACTGATGACTGCAAAGATGCTAAATGCAGGGCGGCTGGTAGCGTTGAAGGTAGCTTTGGAGGGATTGTTGTTACGGG
TAATTCTTCAGTAGAGGCGTGGCGGCGAAGCGATGGTGGAAGTAAATCTAAACTTTACATAGATACCAATGGAGCAAAGT
TACCCAATTCAGGAGCCAGTCAACAGCCGCGCTACATTATAGAATATATCAGCACTCAAAATGACGGTTCGGTCATTTAC
CGCGTTACGGCTAAAGCGTGGGGTAAAAATGCGAATACCGTTGTGGTTTTGCAATCGTATGTATCTGCCGGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
52.717 |
100 |
0.527 |