Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CKV66_RS01975 | Genome accession | NZ_LT906434 |
| Coordinates | 407387..408757 (+) | Length | 456 a.a. |
| NCBI ID | WP_085363947.1 | Uniprot ID | A0AB38DNF5 |
| Organism | Neisseria zoodegmatis strain NCTC12230 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 402387..413757
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV66_RS01955 (SAMEA4504057_00385) | - | 402928..403695 (+) | 768 | WP_085363946.1 | cell division protein FtsQ/DivIB | - |
| CKV66_RS01960 (SAMEA4504057_00386) | ftsA | 403720..404955 (+) | 1236 | WP_054599836.1 | cell division protein FtsA | - |
| CKV66_RS01965 (SAMEA4504057_00387) | ftsZ | 405093..406265 (+) | 1173 | WP_054599837.1 | cell division protein FtsZ | - |
| CKV66_RS01970 (SAMEA4504057_00388) | - | 406664..407167 (+) | 504 | WP_054599838.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| CKV66_RS01975 (SAMEA4504057_00389) | pilA | 407387..408757 (+) | 1371 | WP_085363947.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| CKV66_RS01980 (SAMEA4504057_00390) | - | 408883..409662 (-) | 780 | WP_085363948.1 | ParA family protein | - |
| CKV66_RS01985 (SAMEA4504057_00391) | dxs | 409908..411812 (-) | 1905 | WP_085363949.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| CKV66_RS01990 (SAMEA4504057_00392) | murU | 411998..412696 (-) | 699 | WP_085363950.1 | N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU | - |
| CKV66_RS01995 (SAMEA4504057_00393) | - | 412865..413281 (+) | 417 | WP_157739138.1 | META domain-containing protein | - |
Sequence
Protein
Download Length: 456 a.a. Molecular weight: 48747.23 Da Isoelectric Point: 4.2918
>NTDB_id=1146925 CKV66_RS01975 WP_085363947.1 407387..408757(+) (pilA) [Neisseria zoodegmatis strain NCTC12230]
MFSFFKRKKKQETAETVAEPVQTPVSEAAVENADEPSALEISTPETLEPLTETQLEAVEEHEESSVLDQLVSDVVSGSSE
LPEQYDPNAPVAKIHVSPIPEGDAAPVEEAAELNSSELADALRLPDSIATMTAPVVAAADEPAEPVAEEDEPAKLGWAAR
LKKGLTKSRDQMAKSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVRKRVSLRGLKDGNELRGALKDAIYDL
IKPLQKPLVIPDNGQPFVIMLAGINGAGKTTSIGKLAKYFQSQGKSVLLAAGDTFRAAAREQLQEWGARNGVTVISQSTG
DSAAVCFDAVEAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKSMPDAPHEIIVVLDANIGQNAINQVVAFDDAL
DVTGLIVTKLDGTAKGGILAALASNRPIPVRYIGVGESIDDLRPFDARAFVDALFD
MFSFFKRKKKQETAETVAEPVQTPVSEAAVENADEPSALEISTPETLEPLTETQLEAVEEHEESSVLDQLVSDVVSGSSE
LPEQYDPNAPVAKIHVSPIPEGDAAPVEEAAELNSSELADALRLPDSIATMTAPVVAAADEPAEPVAEEDEPAKLGWAAR
LKKGLTKSRDQMAKSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVRKRVSLRGLKDGNELRGALKDAIYDL
IKPLQKPLVIPDNGQPFVIMLAGINGAGKTTSIGKLAKYFQSQGKSVLLAAGDTFRAAAREQLQEWGARNGVTVISQSTG
DSAAVCFDAVEAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKSMPDAPHEIIVVLDANIGQNAINQVVAFDDAL
DVTGLIVTKLDGTAKGGILAALASNRPIPVRYIGVGESIDDLRPFDARAFVDALFD
Nucleotide
Download Length: 1371 bp
>NTDB_id=1146925 CKV66_RS01975 WP_085363947.1 407387..408757(+) (pilA) [Neisseria zoodegmatis strain NCTC12230]
ATGTTCAGCTTCTTTAAACGCAAGAAAAAACAGGAAACTGCCGAAACTGTTGCCGAACCTGTGCAAACGCCGGTATCGGA
AGCGGCTGTCGAAAATGCGGACGAGCCGTCCGCCCTTGAAATTTCCACTCCCGAAACCCTCGAACCGCTGACCGAAACCC
AGCTTGAAGCGGTAGAAGAGCATGAAGAAAGCAGCGTACTCGACCAATTGGTGTCGGACGTGGTTTCCGGCAGCAGCGAG
TTGCCCGAACAATACGATCCGAATGCGCCGGTAGCCAAAATCCACGTTTCGCCGATACCCGAAGGCGATGCCGCACCGGT
GGAAGAGGCGGCCGAACTCAACAGCAGCGAATTGGCCGATGCTTTGAGATTGCCCGACAGTATCGCCACGATGACTGCGC
CGGTGGTTGCCGCTGCCGACGAGCCTGCCGAACCTGTGGCGGAGGAAGACGAACCAGCCAAGCTCGGTTGGGCGGCGCGT
TTGAAAAAAGGCTTAACCAAATCGCGCGACCAAATGGCCAAATCGCTGGCCGGCGTATTCGGCGGCGGCCAGATCGACGA
AGACCTGTATGAAGAGCTGGAAACCGTGCTGATTACCAGCGATATGGGCATGGAAGCCACCGAATATCTGATGAAAGACG
TGCGCAAACGCGTGTCGCTGCGCGGTTTGAAAGACGGCAACGAGTTGCGCGGCGCTTTGAAAGACGCGATTTACGATTTG
ATCAAGCCGTTGCAGAAACCGCTGGTGATTCCCGACAACGGGCAGCCTTTTGTGATTATGCTGGCCGGCATCAATGGCGC
GGGCAAAACCACTTCTATCGGCAAACTGGCCAAATATTTCCAATCGCAAGGTAAGTCGGTGCTGCTGGCGGCGGGCGATA
CTTTCCGTGCCGCCGCCCGCGAGCAGTTGCAGGAATGGGGCGCGCGCAACGGCGTGACCGTGATTTCGCAAAGCACAGGC
GACTCCGCCGCTGTCTGTTTCGATGCCGTAGAAGCCGCCAAAGCGCGCGGTATCGACATCGTGCTGGCCGACACCGCAGG
CCGCCTGCCGACCCAACTTCATTTGATGGAAGAAATCAAAAAAGTAAAACGCGTGCTGCAAAAATCCATGCCCGACGCGC
CGCATGAAATCATCGTGGTGTTGGATGCGAATATCGGCCAAAACGCTATTAATCAAGTGGTTGCGTTTGATGATGCGCTG
GACGTTACCGGCCTGATTGTTACCAAACTCGACGGTACGGCCAAAGGCGGCATTCTCGCCGCGCTGGCTTCCAACCGCCC
GATTCCGGTGCGCTATATCGGCGTGGGTGAAAGCATCGACGACTTGCGCCCGTTTGATGCGCGTGCGTTTGTGGATGCTT
TGTTTGACTGA
ATGTTCAGCTTCTTTAAACGCAAGAAAAAACAGGAAACTGCCGAAACTGTTGCCGAACCTGTGCAAACGCCGGTATCGGA
AGCGGCTGTCGAAAATGCGGACGAGCCGTCCGCCCTTGAAATTTCCACTCCCGAAACCCTCGAACCGCTGACCGAAACCC
AGCTTGAAGCGGTAGAAGAGCATGAAGAAAGCAGCGTACTCGACCAATTGGTGTCGGACGTGGTTTCCGGCAGCAGCGAG
TTGCCCGAACAATACGATCCGAATGCGCCGGTAGCCAAAATCCACGTTTCGCCGATACCCGAAGGCGATGCCGCACCGGT
GGAAGAGGCGGCCGAACTCAACAGCAGCGAATTGGCCGATGCTTTGAGATTGCCCGACAGTATCGCCACGATGACTGCGC
CGGTGGTTGCCGCTGCCGACGAGCCTGCCGAACCTGTGGCGGAGGAAGACGAACCAGCCAAGCTCGGTTGGGCGGCGCGT
TTGAAAAAAGGCTTAACCAAATCGCGCGACCAAATGGCCAAATCGCTGGCCGGCGTATTCGGCGGCGGCCAGATCGACGA
AGACCTGTATGAAGAGCTGGAAACCGTGCTGATTACCAGCGATATGGGCATGGAAGCCACCGAATATCTGATGAAAGACG
TGCGCAAACGCGTGTCGCTGCGCGGTTTGAAAGACGGCAACGAGTTGCGCGGCGCTTTGAAAGACGCGATTTACGATTTG
ATCAAGCCGTTGCAGAAACCGCTGGTGATTCCCGACAACGGGCAGCCTTTTGTGATTATGCTGGCCGGCATCAATGGCGC
GGGCAAAACCACTTCTATCGGCAAACTGGCCAAATATTTCCAATCGCAAGGTAAGTCGGTGCTGCTGGCGGCGGGCGATA
CTTTCCGTGCCGCCGCCCGCGAGCAGTTGCAGGAATGGGGCGCGCGCAACGGCGTGACCGTGATTTCGCAAAGCACAGGC
GACTCCGCCGCTGTCTGTTTCGATGCCGTAGAAGCCGCCAAAGCGCGCGGTATCGACATCGTGCTGGCCGACACCGCAGG
CCGCCTGCCGACCCAACTTCATTTGATGGAAGAAATCAAAAAAGTAAAACGCGTGCTGCAAAAATCCATGCCCGACGCGC
CGCATGAAATCATCGTGGTGTTGGATGCGAATATCGGCCAAAACGCTATTAATCAAGTGGTTGCGTTTGATGATGCGCTG
GACGTTACCGGCCTGATTGTTACCAAACTCGACGGTACGGCCAAAGGCGGCATTCTCGCCGCGCTGGCTTCCAACCGCCC
GATTCCGGTGCGCTATATCGGCGTGGGTGAAAGCATCGACGACTTGCGCCCGTTTGATGCGCGTGCGTTTGTGGATGCTT
TGTTTGACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
68.777 |
100 |
0.691 |