Detailed information NTG1145961

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: BQ6873_RS15030
• Genome accession: NZ_LT671418
• Coordinates: 3161795..3163219 (+)
• Length: 474 a.a.
• NCBI ID: WP_076593372.1
• Uniprot ID: -
• Organism: Herminiimonas arsenitoxidans strain AS8
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3156795..3168219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BQ6873_RS15010	ffh	3157239..3158606 (-)	1368	WP_076593368.1	signal recognition particle protein	-
BQ6873_RS15015	-	3159022..3159831 (+)	810	WP_076593369.1	inner membrane protein YpjD	-
BQ6873_RS15020	-	3159828..3160067 (+)	240	WP_076593370.1	PP0621 family protein	-
BQ6873_RS15025	-	3160071..3161765 (+)	1695	WP_076593371.1	PAS domain-containing sensor histidine kinase	-
BQ6873_RS15030	pilR	3161795..3163219 (+)	1425	WP_076593372.1	sigma-54 dependent transcriptional regulator	Regulator
BQ6873_RS15035	ampD	3163206..3163844 (+)	639	WP_076593373.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
BQ6873_RS15040	-	3164218..3167112 (+)	2895	WP_076593374.1	ribonucleoside-diphosphate reductase subunit alpha	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 51774.38 Da
• Isoelectric Point: 5.0644

>NTDB_id=1145961 BQ6873_RS15030 WP_076593372.1 3161795..3163219(+) (pilR) [Herminiimonas arsenitoxidans strain AS8]
MTSPRILIVDDEADLRELLEITLVKMGLDIDSAQNLTVARDYLAKNEYALVLTDMRLPDGLGIELVQEITAQYKNTPVAV
ITAFGSADNAVVALKAGAFDYLSKPVGLEQLRVMVRSALRISQTGTDQAIEKTAAPTSLRLMGQSDAMHALRVQIARLAR
SMAPVAISGESGSGKELAARDIHAQSARSDKSFIAVNCGAIPENLMEAEFFGYRKGAFTGAVDDRDGFFQAANGGTLLLD
EVADLPLAMQVKLLRAIQERRVRKVGATVEEPVDVRIISATHQNLHDCVGKGTFRQDLYYRLNVIELNLPPLRERLDDIA
LLAKTILTRLGAEQTTLTPAVLEALQHYSFPGNVRELENILERALAFSNDGLIEVADLVLKAPSAAKAVAVAPQAELLAV
PSDVKVAEMATSVTSSARDLPESLPDHLDDVEREIIRRALSKTQFNRTQAAELLGISFRQLRYRMQRLDINAPE

Nucleotide

• Length: 1425 bp

>NTDB_id=1145961 BQ6873_RS15030 WP_076593372.1 3161795..3163219(+) (pilR) [Herminiimonas arsenitoxidans strain AS8]
ATGACCTCACCTCGCATCCTGATTGTTGATGATGAGGCAGATCTGCGTGAGCTGCTGGAAATCACACTCGTCAAAATGGG
CCTGGATATCGATAGCGCCCAGAATCTGACTGTCGCGCGCGACTATCTTGCCAAGAATGAATACGCACTGGTCTTGACCG
ATATGCGCTTGCCGGATGGCTTGGGCATAGAGTTGGTGCAGGAAATTACCGCGCAATACAAGAACACGCCGGTTGCCGTG
ATTACTGCATTCGGTAGCGCCGACAATGCGGTTGTGGCATTGAAGGCAGGTGCCTTTGATTATTTATCCAAACCAGTAGG
GCTGGAGCAATTGCGCGTGATGGTGCGTTCGGCTTTGCGTATCAGCCAGACTGGCACAGATCAAGCAATCGAGAAAACTG
CCGCGCCAACTTCCTTGCGCTTGATGGGGCAATCGGATGCGATGCATGCCTTGCGCGTGCAAATCGCACGTCTGGCACGC
AGCATGGCACCGGTTGCGATCAGCGGGGAATCCGGCAGCGGCAAAGAATTGGCTGCACGCGATATCCATGCGCAAAGTGC
ACGTAGCGACAAATCTTTTATCGCAGTCAATTGCGGCGCGATCCCGGAAAATTTGATGGAAGCGGAATTTTTCGGCTATC
GCAAAGGTGCGTTTACCGGTGCGGTGGACGATAGAGATGGTTTCTTCCAGGCAGCTAACGGTGGCACTTTGTTGCTGGAT
GAGGTGGCGGATCTGCCGCTGGCGATGCAAGTCAAATTGTTGCGCGCGATACAGGAACGTCGTGTGCGCAAGGTTGGGGC
GACGGTGGAAGAGCCAGTTGATGTTCGTATTATTAGTGCGACGCATCAAAATTTGCACGATTGCGTTGGCAAAGGAACGT
TCCGGCAGGATTTGTATTACCGCCTGAATGTGATCGAACTGAATTTGCCACCGCTACGTGAGCGTCTGGACGATATCGCC
TTGCTGGCAAAAACGATCTTGACGCGACTGGGTGCCGAGCAAACCACATTGACGCCAGCCGTGCTGGAAGCGCTGCAGCA
TTATTCTTTCCCGGGCAATGTGCGCGAACTGGAAAATATACTGGAACGTGCATTGGCATTTTCCAATGATGGCTTGATAG
AGGTTGCTGATCTGGTATTGAAGGCGCCAAGTGCAGCGAAAGCCGTGGCTGTTGCTCCGCAAGCAGAACTTCTCGCGGTT
CCGTCAGATGTGAAAGTGGCGGAGATGGCAACAAGCGTCACCTCTTCTGCACGTGACTTGCCGGAATCATTGCCGGATCA
TCTGGATGATGTCGAACGCGAAATCATTCGACGTGCATTAAGCAAAACACAATTCAATCGTACCCAAGCGGCCGAACTGC
TCGGTATCAGCTTCCGTCAATTGCGTTATCGCATGCAGCGACTAGATATTAATGCACCGGAATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (428-468)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	54.622	100	0.549
pilR	Acinetobacter baumannii strain A118	43.277	100	0.435